Protein–RNA interactions for Protein: P51148

RAB5C, Ras-related protein Rab-5C, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5CP51148 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.6□□□□□ -0.39
RAB5CP51148 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
RAB5CP51148 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB5CP51148 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.6□□□□□ -0.39
RAB5CP51148 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC12.6□□□□□ -0.39
RAB5CP51148 TSPY22P-201ENST00000427496 604 ntBASIC12.6□□□□□ -0.39
RAB5CP51148 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC12.6□□□□□ -0.39
RAB5CP51148 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC12.6□□□□□ -0.39
RAB5CP51148 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC12.6□□□□□ -0.39
RAB5CP51148 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB5CP51148 AC021097.1-201ENST00000607902 574 ntBASIC12.6□□□□□ -0.39
RAB5CP51148 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 PPT1-213ENST00000641319 2388 ntBASIC12.6□□□□□ -0.39
RAB5CP51148 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 MIR193BHG-211ENST00000641433 5365 ntBASIC12.6□□□□□ -0.39
RAB5CP51148 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB5CP51148 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
RAB5CP51148 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB5CP51148 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC12.6□□□□□ -0.39
RAB5CP51148 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
RAB5CP51148 ACE3P-201ENST00000423435 1973 ntBASIC12.6□□□□□ -0.39
RAB5CP51148 AC134407.2-201ENST00000625089 1978 ntBASIC12.6□□□□□ -0.39
RAB5CP51148 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.59□□□□□ -0.39
RAB5CP51148 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RAB5CP51148 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RAB5CP51148 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.59□□□□□ -0.39
RAB5CP51148 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
RAB5CP51148 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC12.59□□□□□ -0.39
RAB5CP51148 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.59□□□□□ -0.39
RAB5CP51148 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
RAB5CP51148 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB5CP51148 ABR-204ENST00000543210 1049 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB5CP51148 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB5CP51148 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.59□□□□□ -0.39
RAB5CP51148 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB5CP51148 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.59□□□□□ -0.39
RAB5CP51148 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
RAB5CP51148 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
RAB5CP51148 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.59□□□□□ -0.39
RAB5CP51148 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
RAB5CP51148 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
RAB5CP51148 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
RAB5CP51148 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
RAB5CP51148 MST1P2-201ENST00000457982 2291 ntBASIC12.59□□□□□ -0.39
RAB5CP51148 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
RAB5CP51148 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
RAB5CP51148 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 MME-217ENST00000616757 1315 ntTSL 5 BASIC12.59□□□□□ -0.39
RAB5CP51148 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
RAB5CP51148 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
RAB5CP51148 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RAB5CP51148 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.58□□□□□ -0.39
RAB5CP51148 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
RAB5CP51148 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
RAB5CP51148 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5CP51148 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
RAB5CP51148 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms