Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HADHAP40939 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HADHAP40939 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HADHAP40939 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.83■□□□□ 0.12
HADHAP40939 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.83■□□□□ 0.12
HADHAP40939 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC15.83■□□□□ 0.12
HADHAP40939 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HADHAP40939 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.83■□□□□ 0.12
HADHAP40939 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HADHAP40939 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HADHAP40939 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HADHAP40939 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HADHAP40939 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
HADHAP40939 KRT8P44-201ENST00000441609 1350 ntBASIC15.83■□□□□ 0.12
HADHAP40939 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HADHAP40939 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HADHAP40939 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HADHAP40939 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HADHAP40939 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HADHAP40939 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.83■□□□□ 0.12
HADHAP40939 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.83■□□□□ 0.12
HADHAP40939 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HADHAP40939 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.83■□□□□ 0.12
HADHAP40939 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.83■□□□□ 0.12
HADHAP40939 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HADHAP40939 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HADHAP40939 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HADHAP40939 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.82■□□□□ 0.12
HADHAP40939 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.82■□□□□ 0.12
HADHAP40939 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.82■□□□□ 0.12
HADHAP40939 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.82■□□□□ 0.12
HADHAP40939 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.82■□□□□ 0.12
HADHAP40939 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.82■□□□□ 0.12
HADHAP40939 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HADHAP40939 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.82■□□□□ 0.12
HADHAP40939 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HADHAP40939 MIR943-201ENST00000401286 94 ntBASIC15.82■□□□□ 0.12
HADHAP40939 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.82■□□□□ 0.12
HADHAP40939 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.82■□□□□ 0.12
HADHAP40939 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.82■□□□□ 0.12
HADHAP40939 RN7SL618P-201ENST00000477850 296 ntBASIC15.82■□□□□ 0.12
HADHAP40939 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC15.82■□□□□ 0.12
HADHAP40939 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.82■□□□□ 0.12
HADHAP40939 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.82■□□□□ 0.12
HADHAP40939 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.82■□□□□ 0.12
HADHAP40939 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
HADHAP40939 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
HADHAP40939 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
HADHAP40939 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.82■□□□□ 0.12
HADHAP40939 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.82■□□□□ 0.12
HADHAP40939 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
HADHAP40939 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HADHAP40939 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 GRN-214ENST00000589265 1632 ntTSL 5 BASIC15.82■□□□□ 0.12
HADHAP40939 FAM45BP-202ENST00000592932 1624 ntBASIC15.82■□□□□ 0.12
HADHAP40939 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HADHAP40939 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.82■□□□□ 0.12
HADHAP40939 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.82■□□□□ 0.12
HADHAP40939 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HADHAP40939 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.82■□□□□ 0.12
HADHAP40939 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HADHAP40939 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HADHAP40939 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HADHAP40939 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HADHAP40939 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.81■□□□□ 0.12
HADHAP40939 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HADHAP40939 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HADHAP40939 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.81■□□□□ 0.12
HADHAP40939 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.81■□□□□ 0.12
HADHAP40939 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.81■□□□□ 0.12
HADHAP40939 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.81■□□□□ 0.12
HADHAP40939 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.81■□□□□ 0.12
HADHAP40939 AC087499.5-201ENST00000452760 1342 ntBASIC15.81■□□□□ 0.12
HADHAP40939 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HADHAP40939 AC097493.3-201ENST00000509725 367 ntBASIC15.81■□□□□ 0.12
HADHAP40939 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms