Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.78□□□□□ -0.36
CEACAM3P40198 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CEACAM3P40198 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.78□□□□□ -0.36
CEACAM3P40198 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CEACAM3P40198 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.78□□□□□ -0.36
CEACAM3P40198 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CEACAM3P40198 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CEACAM3P40198 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.78□□□□□ -0.36
CEACAM3P40198 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.78□□□□□ -0.36
CEACAM3P40198 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 MEP1AP4-201ENST00000423244 1087 ntBASIC12.78□□□□□ -0.36
CEACAM3P40198 AC114501.2-201ENST00000439631 535 ntBASIC12.78□□□□□ -0.36
CEACAM3P40198 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.78□□□□□ -0.36
CEACAM3P40198 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.78□□□□□ -0.36
CEACAM3P40198 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.78□□□□□ -0.36
CEACAM3P40198 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CEACAM3P40198 AL390955.2-201ENST00000603032 514 ntBASIC12.78□□□□□ -0.36
CEACAM3P40198 AL355385.1-201ENST00000606123 409 ntBASIC12.78□□□□□ -0.36
CEACAM3P40198 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CEACAM3P40198 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.78□□□□□ -0.36
CEACAM3P40198 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CEACAM3P40198 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CEACAM3P40198 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CEACAM3P40198 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.77□□□□□ -0.36
CEACAM3P40198 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
CEACAM3P40198 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CEACAM3P40198 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CEACAM3P40198 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CEACAM3P40198 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CEACAM3P40198 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CEACAM3P40198 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
CEACAM3P40198 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CEACAM3P40198 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CEACAM3P40198 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CEACAM3P40198 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CEACAM3P40198 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CEACAM3P40198 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CEACAM3P40198 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC12.77□□□□□ -0.37
CEACAM3P40198 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CEACAM3P40198 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CEACAM3P40198 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.77□□□□□ -0.37
CEACAM3P40198 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CEACAM3P40198 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.77□□□□□ -0.37
CEACAM3P40198 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CEACAM3P40198 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.77□□□□□ -0.37
CEACAM3P40198 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.77□□□□□ -0.37
CEACAM3P40198 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CEACAM3P40198 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CEACAM3P40198 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC12.77□□□□□ -0.37
CEACAM3P40198 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.77□□□□□ -0.37
CEACAM3P40198 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.77□□□□□ -0.37
CEACAM3P40198 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CEACAM3P40198 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CEACAM3P40198 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.77□□□□□ -0.37
CEACAM3P40198 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.77□□□□□ -0.37
CEACAM3P40198 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CEACAM3P40198 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.77□□□□□ -0.37
CEACAM3P40198 DEK-201ENST00000244776 1441 ntTSL 2 BASIC12.77□□□□□ -0.37
CEACAM3P40198 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.77□□□□□ -0.37
CEACAM3P40198 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.77□□□□□ -0.37
CEACAM3P40198 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CEACAM3P40198 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
CEACAM3P40198 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CEACAM3P40198 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CEACAM3P40198 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.77□□□□□ -0.37
CEACAM3P40198 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CEACAM3P40198 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.77□□□□□ -0.37
CEACAM3P40198 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.76□□□□□ -0.37
CEACAM3P40198 LINC02199-201ENST00000506655 2702 ntBASIC12.76□□□□□ -0.37
CEACAM3P40198 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CEACAM3P40198 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
CEACAM3P40198 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CEACAM3P40198 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CEACAM3P40198 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CEACAM3P40198 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.76□□□□□ -0.37
CEACAM3P40198 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CEACAM3P40198 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CEACAM3P40198 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
CEACAM3P40198 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms