Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VAMP1P23763 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VAMP1P23763 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC13.27□□□□□ -0.29
VAMP1P23763 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.27□□□□□ -0.29
VAMP1P23763 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.27□□□□□ -0.29
VAMP1P23763 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VAMP1P23763 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VAMP1P23763 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.27□□□□□ -0.29
VAMP1P23763 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VAMP1P23763 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.27□□□□□ -0.29
VAMP1P23763 AC006504.4-201ENST00000592118 1568 ntBASIC13.27□□□□□ -0.29
VAMP1P23763 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC13.27□□□□□ -0.29
VAMP1P23763 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.27□□□□□ -0.29
VAMP1P23763 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.27□□□□□ -0.29
VAMP1P23763 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VAMP1P23763 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
VAMP1P23763 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VAMP1P23763 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
VAMP1P23763 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.27□□□□□ -0.29
VAMP1P23763 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
VAMP1P23763 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.27□□□□□ -0.29
VAMP1P23763 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VAMP1P23763 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.27□□□□□ -0.29
VAMP1P23763 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
VAMP1P23763 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.26□□□□□ -0.29
VAMP1P23763 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.26□□□□□ -0.29
VAMP1P23763 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VAMP1P23763 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.26□□□□□ -0.29
VAMP1P23763 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VAMP1P23763 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
VAMP1P23763 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.26□□□□□ -0.29
VAMP1P23763 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VAMP1P23763 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.26□□□□□ -0.29
VAMP1P23763 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VAMP1P23763 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.26□□□□□ -0.29
VAMP1P23763 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.26□□□□□ -0.29
VAMP1P23763 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
VAMP1P23763 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VAMP1P23763 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
VAMP1P23763 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VAMP1P23763 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.26□□□□□ -0.29
VAMP1P23763 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VAMP1P23763 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VAMP1P23763 NMU-205ENST00000511469 756 ntTSL 3 BASIC13.26□□□□□ -0.29
VAMP1P23763 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.26□□□□□ -0.29
VAMP1P23763 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
VAMP1P23763 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
VAMP1P23763 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.26□□□□□ -0.29
VAMP1P23763 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.26□□□□□ -0.29
VAMP1P23763 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.26□□□□□ -0.29
VAMP1P23763 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.26□□□□□ -0.29
VAMP1P23763 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.26□□□□□ -0.29
VAMP1P23763 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.26□□□□□ -0.29
VAMP1P23763 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.26□□□□□ -0.29
VAMP1P23763 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.26□□□□□ -0.29
VAMP1P23763 AL121956.5-201ENST00000625261 221 ntBASIC13.26□□□□□ -0.29
VAMP1P23763 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
VAMP1P23763 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VAMP1P23763 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VAMP1P23763 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VAMP1P23763 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VAMP1P23763 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VAMP1P23763 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VAMP1P23763 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VAMP1P23763 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.26□□□□□ -0.29
VAMP1P23763 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.26□□□□□ -0.29
VAMP1P23763 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.26□□□□□ -0.29
VAMP1P23763 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.25□□□□□ -0.29
VAMP1P23763 AC006504.5-208ENST00000588784 2401 ntBASIC13.25□□□□□ -0.29
VAMP1P23763 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VAMP1P23763 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VAMP1P23763 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
VAMP1P23763 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VAMP1P23763 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VAMP1P23763 ZBED1P1-201ENST00000502364 1930 ntBASIC13.25□□□□□ -0.29
VAMP1P23763 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.25□□□□□ -0.29
VAMP1P23763 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
VAMP1P23763 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
VAMP1P23763 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
VAMP1P23763 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.25□□□□□ -0.29
VAMP1P23763 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
VAMP1P23763 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
VAMP1P23763 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VAMP1P23763 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VAMP1P23763 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
VAMP1P23763 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
VAMP1P23763 RNU1-129P-201ENST00000384064 167 ntBASIC13.25□□□□□ -0.29
VAMP1P23763 RBM17P3-201ENST00000417687 1192 ntBASIC13.25□□□□□ -0.29
VAMP1P23763 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC13.25□□□□□ -0.29
VAMP1P23763 DUX4L26-201ENST00000489078 1255 ntBASIC13.25□□□□□ -0.29
VAMP1P23763 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VAMP1P23763 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.25□□□□□ -0.29
VAMP1P23763 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC13.25□□□□□ -0.29
VAMP1P23763 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.25□□□□□ -0.29
VAMP1P23763 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.25□□□□□ -0.29
VAMP1P23763 U1.21-201ENST00000580816 167 ntBASIC13.25□□□□□ -0.29
VAMP1P23763 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.25□□□□□ -0.29
VAMP1P23763 MTDHP4-201ENST00000600287 670 ntBASIC13.25□□□□□ -0.29
VAMP1P23763 AL031055.1-201ENST00000606362 631 ntBASIC13.25□□□□□ -0.29
VAMP1P23763 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms