Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.66□□□□□ -0.22
SFTPBP07988 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.66□□□□□ -0.22
SFTPBP07988 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.66□□□□□ -0.22
SFTPBP07988 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
SFTPBP07988 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SFTPBP07988 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.65□□□□□ -0.22
SFTPBP07988 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SFTPBP07988 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.65□□□□□ -0.22
SFTPBP07988 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SFTPBP07988 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SFTPBP07988 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SFTPBP07988 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.65□□□□□ -0.22
SFTPBP07988 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.65□□□□□ -0.22
SFTPBP07988 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.65□□□□□ -0.22
SFTPBP07988 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.65□□□□□ -0.22
SFTPBP07988 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SFTPBP07988 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SFTPBP07988 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SFTPBP07988 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SFTPBP07988 AL627223.1-201ENST00000416693 442 ntBASIC13.65□□□□□ -0.22
SFTPBP07988 SPCS2P4-201ENST00000436160 681 ntBASIC13.65□□□□□ -0.22
SFTPBP07988 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.65□□□□□ -0.22
SFTPBP07988 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SFTPBP07988 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.65□□□□□ -0.22
SFTPBP07988 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.65□□□□□ -0.22
SFTPBP07988 AC061975.2-201ENST00000581722 295 ntBASIC13.65□□□□□ -0.22
SFTPBP07988 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.65□□□□□ -0.22
SFTPBP07988 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.65□□□□□ -0.22
SFTPBP07988 AC104581.4-201ENST00000623126 3052 ntBASIC13.65□□□□□ -0.22
SFTPBP07988 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.65□□□□□ -0.22
SFTPBP07988 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.65□□□□□ -0.22
SFTPBP07988 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
SFTPBP07988 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.65□□□□□ -0.22
SFTPBP07988 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.65□□□□□ -0.22
SFTPBP07988 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SFTPBP07988 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SFTPBP07988 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC13.65□□□□□ -0.22
SFTPBP07988 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SFTPBP07988 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SFTPBP07988 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SFTPBP07988 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SFTPBP07988 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.65□□□□□ -0.22
SFTPBP07988 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SFTPBP07988 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.65□□□□□ -0.22
SFTPBP07988 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.65□□□□□ -0.22
SFTPBP07988 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.65□□□□□ -0.22
SFTPBP07988 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SFTPBP07988 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SFTPBP07988 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.65□□□□□ -0.23
SFTPBP07988 AC092127.1-201ENST00000567093 3455 ntBASIC13.65□□□□□ -0.23
SFTPBP07988 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.23
SFTPBP07988 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SFTPBP07988 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SFTPBP07988 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
SFTPBP07988 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.64□□□□□ -0.23
SFTPBP07988 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SFTPBP07988 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.64□□□□□ -0.23
SFTPBP07988 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SFTPBP07988 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SFTPBP07988 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
SFTPBP07988 AC018892.3-201ENST00000623986 2499 ntBASIC13.64□□□□□ -0.23
SFTPBP07988 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SFTPBP07988 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SFTPBP07988 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
SFTPBP07988 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SFTPBP07988 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.64□□□□□ -0.23
SFTPBP07988 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.64□□□□□ -0.23
SFTPBP07988 KRT18P32-201ENST00000424695 1287 ntBASIC13.64□□□□□ -0.23
SFTPBP07988 AC069335.1-201ENST00000489972 472 ntBASIC13.64□□□□□ -0.23
SFTPBP07988 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.64□□□□□ -0.23
SFTPBP07988 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.64□□□□□ -0.23
SFTPBP07988 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.64□□□□□ -0.23
SFTPBP07988 AC004449.1-201ENST00000564240 433 ntBASIC13.64□□□□□ -0.23
SFTPBP07988 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.64□□□□□ -0.23
SFTPBP07988 AC027307.2-201ENST00000591252 911 ntBASIC13.64□□□□□ -0.23
SFTPBP07988 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.64□□□□□ -0.23
SFTPBP07988 AC106028.4-201ENST00000614509 607 ntBASIC13.64□□□□□ -0.23
SFTPBP07988 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SFTPBP07988 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SFTPBP07988 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SFTPBP07988 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.64□□□□□ -0.23
SFTPBP07988 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SFTPBP07988 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SFTPBP07988 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SFTPBP07988 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.64□□□□□ -0.23
SFTPBP07988 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.64□□□□□ -0.23
SFTPBP07988 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SFTPBP07988 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SFTPBP07988 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.64□□□□□ -0.23
SFTPBP07988 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
SFTPBP07988 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.64□□□□□ -0.23
SFTPBP07988 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.64□□□□□ -0.23
SFTPBP07988 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SFTPBP07988 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SFTPBP07988 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
SFTPBP07988 UXT-AS1-201ENST00000590504 1525 ntBASIC13.64□□□□□ -0.23
SFTPBP07988 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
SFTPBP07988 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SFTPBP07988 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.64□□□□□ -0.23
SFTPBP07988 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms