Protein–RNA interactions for Protein: P02656

APOC3, Apolipoprotein C-III, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3P02656 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
APOC3P02656 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC3P02656 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOC3P02656 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
APOC3P02656 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
APOC3P02656 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC3P02656 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC3P02656 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC3P02656 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOC3P02656 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC3P02656 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
APOC3P02656 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC3P02656 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
APOC3P02656 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC12.51□□□□□ -0.41
APOC3P02656 METTL26-203ENST00000397664 604 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC3P02656 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC3P02656 DDT-203ENST00000403754 569 ntTSL 3 BASIC12.51□□□□□ -0.41
APOC3P02656 MESTP1-201ENST00000404287 994 ntBASIC12.51□□□□□ -0.41
APOC3P02656 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC12.51□□□□□ -0.41
APOC3P02656 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC12.51□□□□□ -0.41
APOC3P02656 AC239809.2-201ENST00000415381 517 ntBASIC12.51□□□□□ -0.41
APOC3P02656 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC3P02656 DDT-206ENST00000430101 573 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC3P02656 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC3P02656 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
APOC3P02656 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC3P02656 TK2-208ENST00000545043 1120 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC3P02656 AC131212.1-201ENST00000613771 668 ntBASIC12.51□□□□□ -0.41
APOC3P02656 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC12.51□□□□□ -0.41
APOC3P02656 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
APOC3P02656 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.51□□□□□ -0.41
APOC3P02656 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
APOC3P02656 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
APOC3P02656 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
APOC3P02656 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC3P02656 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC3P02656 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC3P02656 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC3P02656 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC3P02656 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOC3P02656 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOC3P02656 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC12.51□□□□□ -0.41
APOC3P02656 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC3P02656 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.51□□□□□ -0.41
APOC3P02656 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC3P02656 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC3P02656 AC011700.1-201ENST00000610409 2627 ntBASIC12.51□□□□□ -0.41
APOC3P02656 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC3P02656 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC3P02656 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
APOC3P02656 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC3P02656 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC3P02656 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC3P02656 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.51□□□□□ -0.41
APOC3P02656 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC3P02656 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC3P02656 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC3P02656 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.5□□□□□ -0.41
APOC3P02656 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
APOC3P02656 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC12.5□□□□□ -0.41
APOC3P02656 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
APOC3P02656 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC12.5□□□□□ -0.41
APOC3P02656 AC006015.1-201ENST00000429970 570 ntBASIC12.5□□□□□ -0.41
APOC3P02656 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC12.5□□□□□ -0.41
APOC3P02656 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC12.5□□□□□ -0.41
APOC3P02656 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.5□□□□□ -0.41
APOC3P02656 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
APOC3P02656 AL023875.1-201ENST00000640777 796 ntBASIC12.5□□□□□ -0.41
APOC3P02656 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 WASH3P-207ENST00000560956 1394 ntBASIC12.5□□□□□ -0.41
APOC3P02656 FO538757.1-201ENST00000623083 1397 ntBASIC12.5□□□□□ -0.41
APOC3P02656 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.5□□□□□ -0.41
APOC3P02656 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.5□□□□□ -0.41
APOC3P02656 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.5□□□□□ -0.41
APOC3P02656 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC12.5□□□□□ -0.41
APOC3P02656 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.5□□□□□ -0.41
APOC3P02656 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
APOC3P02656 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.5□□□□□ -0.41
APOC3P02656 AC127383.1-201ENST00000444697 1800 ntBASIC12.5□□□□□ -0.41
APOC3P02656 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 U82695.1-201ENST00000635752 1889 ntBASIC12.5□□□□□ -0.41
APOC3P02656 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.5□□□□□ -0.41
APOC3P02656 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC3P02656 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms