Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 SLC25A47P1-201ENST00000531577 414 ntBASIC18.51■□□□□ 0.55
MBD4O95243 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MBD4O95243 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.51■□□□□ 0.55
MBD4O95243 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC18.51■□□□□ 0.55
MBD4O95243 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.51■□□□□ 0.55
MBD4O95243 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.51■□□□□ 0.55
MBD4O95243 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
MBD4O95243 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC18.51■□□□□ 0.55
MBD4O95243 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD4O95243 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD4O95243 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.51■□□□□ 0.55
MBD4O95243 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
MBD4O95243 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC18.51■□□□□ 0.55
MBD4O95243 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MBD4O95243 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.5■□□□□ 0.55
MBD4O95243 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.5■□□□□ 0.55
MBD4O95243 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
MBD4O95243 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
MBD4O95243 AC087481.3-201ENST00000602886 1894 ntBASIC18.5■□□□□ 0.55
MBD4O95243 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.5■□□□□ 0.55
MBD4O95243 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.5■□□□□ 0.55
MBD4O95243 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
MBD4O95243 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
MBD4O95243 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
MBD4O95243 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.5■□□□□ 0.55
MBD4O95243 CROCCP4-201ENST00000457096 498 ntBASIC18.5■□□□□ 0.55
MBD4O95243 GPR53P-205ENST00000457298 1084 ntBASIC18.5■□□□□ 0.55
MBD4O95243 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.5■□□□□ 0.55
MBD4O95243 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.5■□□□□ 0.55
MBD4O95243 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.5■□□□□ 0.55
MBD4O95243 PTP4A1P2-201ENST00000546033 454 ntBASIC18.5■□□□□ 0.55
MBD4O95243 AC009486.1-201ENST00000569860 813 ntBASIC18.5■□□□□ 0.55
MBD4O95243 BTNL10-201ENST00000595971 695 ntBASIC18.5■□□□□ 0.55
MBD4O95243 AC233724.13-201ENST00000598383 410 ntBASIC18.5■□□□□ 0.55
MBD4O95243 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.5■□□□□ 0.55
MBD4O95243 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 AC018665.1-201ENST00000622927 1362 ntBASIC18.5■□□□□ 0.55
MBD4O95243 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
MBD4O95243 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.5■□□□□ 0.55
MBD4O95243 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
MBD4O95243 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MBD4O95243 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MBD4O95243 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.49■□□□□ 0.55
MBD4O95243 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MBD4O95243 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MBD4O95243 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MBD4O95243 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MBD4O95243 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MBD4O95243 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MBD4O95243 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
MBD4O95243 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MBD4O95243 CICP11-201ENST00000434745 2827 ntBASIC18.49■□□□□ 0.55
MBD4O95243 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MBD4O95243 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MBD4O95243 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
MBD4O95243 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MBD4O95243 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
MBD4O95243 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
MBD4O95243 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MBD4O95243 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MBD4O95243 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.49■□□□□ 0.55
MBD4O95243 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
MBD4O95243 RPL5P21-201ENST00000404620 815 ntBASIC18.49■□□□□ 0.55
MBD4O95243 ARSEP1-201ENST00000420443 635 ntBASIC18.49■□□□□ 0.55
MBD4O95243 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.49■□□□□ 0.55
MBD4O95243 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.49■□□□□ 0.55
MBD4O95243 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.49■□□□□ 0.55
MBD4O95243 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MBD4O95243 AP001889.1-201ENST00000525414 633 ntBASIC18.49■□□□□ 0.55
MBD4O95243 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
MBD4O95243 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.49■□□□□ 0.55
MBD4O95243 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.49■□□□□ 0.55
MBD4O95243 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.49■□□□□ 0.55
MBD4O95243 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.49■□□□□ 0.55
MBD4O95243 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
MBD4O95243 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.49■□□□□ 0.55
MBD4O95243 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MBD4O95243 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
MBD4O95243 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.49■□□□□ 0.55
MBD4O95243 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms