Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
PCDHGC4Q9Y5F7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.74■□□□□ 0.11
PCDHGC4Q9Y5F7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 AC104596.2-201ENST00000512793 793 ntBASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 TP53TG3HP-202ENST00000569755 579 ntBASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 AC073347.1-201ENST00000421633 2643 ntBASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 AC046158.3-201ENST00000624947 2558 ntBASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
PCDHGC4Q9Y5F7 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 AL035633.1-201ENST00000406139 838 ntBASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 WASH4P-201ENST00000564273 1246 ntBASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.72■□□□□ 0.11
PCDHGC4Q9Y5F7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 PPT1-215ENST00000641471 2368 ntBASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 DGCR5-201ENST00000399539 862 ntBASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 ELK1P1-201ENST00000485699 580 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms