Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 ACTL9-202ENST00000612068 1252 ntBASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CCM2LQ9NUG4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 CICP14-201ENST00000629111 2732 ntBASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 AC190387.1-201ENST00000551683 408 ntBASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 AC010507.1-201ENST00000633895 436 ntBASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CCM2LQ9NUG4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 AC074386.1-202ENST00000463561 864 ntBASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 AC069262.1-201ENST00000539058 672 ntBASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 AC096734.2-201ENST00000562054 433 ntBASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 AC005498.2-205ENST00000593218 784 ntBASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CCM2LQ9NUG4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms