Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.89□□□□□ -0.19
VRK1Q99986 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
VRK1Q99986 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.89□□□□□ -0.19
VRK1Q99986 AC093724.1-201ENST00000448659 1027 ntBASIC13.89□□□□□ -0.19
VRK1Q99986 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.89□□□□□ -0.19
VRK1Q99986 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.89□□□□□ -0.19
VRK1Q99986 RN7SL828P-201ENST00000607615 303 ntBASIC13.89□□□□□ -0.19
VRK1Q99986 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 AL138828.2-201ENST00000615812 383 ntBASIC13.89□□□□□ -0.19
VRK1Q99986 AL590560.3-201ENST00000623350 461 ntBASIC13.89□□□□□ -0.19
VRK1Q99986 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.89□□□□□ -0.19
VRK1Q99986 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
VRK1Q99986 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.89□□□□□ -0.19
VRK1Q99986 CICP14-201ENST00000629111 2732 ntBASIC13.89□□□□□ -0.19
VRK1Q99986 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
VRK1Q99986 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.89□□□□□ -0.19
VRK1Q99986 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.89□□□□□ -0.19
VRK1Q99986 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
VRK1Q99986 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
VRK1Q99986 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.89□□□□□ -0.19
VRK1Q99986 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
VRK1Q99986 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.89□□□□□ -0.19
VRK1Q99986 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
VRK1Q99986 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
VRK1Q99986 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.88□□□□□ -0.19
VRK1Q99986 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
VRK1Q99986 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
VRK1Q99986 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.88□□□□□ -0.19
VRK1Q99986 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
VRK1Q99986 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.88□□□□□ -0.19
VRK1Q99986 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.88□□□□□ -0.19
VRK1Q99986 AC002472.2-201ENST00000442739 958 ntBASIC13.88□□□□□ -0.19
VRK1Q99986 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.88□□□□□ -0.19
VRK1Q99986 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
VRK1Q99986 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
VRK1Q99986 AC105021.1-202ENST00000570572 669 ntBASIC13.88□□□□□ -0.19
VRK1Q99986 RN7SL204P-201ENST00000582831 262 ntBASIC13.88□□□□□ -0.19
VRK1Q99986 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.88□□□□□ -0.19
VRK1Q99986 LINC02560-201ENST00000596379 459 ntBASIC13.88□□□□□ -0.19
VRK1Q99986 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.88□□□□□ -0.19
VRK1Q99986 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC13.88□□□□□ -0.19
VRK1Q99986 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.88□□□□□ -0.19
VRK1Q99986 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
VRK1Q99986 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.88□□□□□ -0.19
VRK1Q99986 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 CICP4-201ENST00000447359 2812 ntBASIC13.88□□□□□ -0.19
VRK1Q99986 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.88□□□□□ -0.19
VRK1Q99986 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.88□□□□□ -0.19
VRK1Q99986 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.88□□□□□ -0.19
VRK1Q99986 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VRK1Q99986 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.88□□□□□ -0.19
VRK1Q99986 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
VRK1Q99986 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VRK1Q99986 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK1Q99986 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.87□□□□□ -0.19
VRK1Q99986 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.87□□□□□ -0.19
VRK1Q99986 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.87□□□□□ -0.19
VRK1Q99986 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
VRK1Q99986 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK1Q99986 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VRK1Q99986 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC13.87□□□□□ -0.19
VRK1Q99986 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VRK1Q99986 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VRK1Q99986 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.87□□□□□ -0.19
VRK1Q99986 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms