Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN18Q99952 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN18Q99952 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
PTPN18Q99952 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN18Q99952 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN18Q99952 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPN18Q99952 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPN18Q99952 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
PTPN18Q99952 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN18Q99952 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN18Q99952 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN18Q99952 AL627389.1-201ENST00000413508 1182 ntBASIC17.57■□□□□ 0.4
PTPN18Q99952 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PTPN18Q99952 KRT18P66-201ENST00000452970 1269 ntBASIC17.57■□□□□ 0.4
PTPN18Q99952 RPL18P13-201ENST00000478088 569 ntBASIC17.57■□□□□ 0.4
PTPN18Q99952 RN7SL818P-201ENST00000485099 259 ntBASIC17.57■□□□□ 0.4
PTPN18Q99952 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.57■□□□□ 0.4
PTPN18Q99952 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.57■□□□□ 0.4
PTPN18Q99952 PGAM1P5-201ENST00000548011 764 ntBASIC17.57■□□□□ 0.4
PTPN18Q99952 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.57■□□□□ 0.4
PTPN18Q99952 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.57■□□□□ 0.4
PTPN18Q99952 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC17.57■□□□□ 0.4
PTPN18Q99952 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN18Q99952 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
PTPN18Q99952 RN7SL725P-201ENST00000606439 259 ntBASIC17.57■□□□□ 0.4
PTPN18Q99952 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.57■□□□□ 0.4
PTPN18Q99952 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN18Q99952 AL603764.1-201ENST00000636452 321 ntBASIC17.57■□□□□ 0.4
PTPN18Q99952 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN18Q99952 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.57■□□□□ 0.4
PTPN18Q99952 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN18Q99952 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.57■□□□□ 0.4
PTPN18Q99952 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
PTPN18Q99952 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPN18Q99952 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN18Q99952 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN18Q99952 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
PTPN18Q99952 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.57■□□□□ 0.4
PTPN18Q99952 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN18Q99952 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN18Q99952 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN18Q99952 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN18Q99952 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN18Q99952 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN18Q99952 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN18Q99952 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN18Q99952 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN18Q99952 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN18Q99952 RN7SKP214-201ENST00000364208 315 ntBASIC17.56■□□□□ 0.4
PTPN18Q99952 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN18Q99952 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.56■□□□□ 0.4
PTPN18Q99952 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.56■□□□□ 0.4
PTPN18Q99952 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN18Q99952 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC17.56■□□□□ 0.4
PTPN18Q99952 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC17.56■□□□□ 0.4
PTPN18Q99952 AC073150.1-201ENST00000450406 1084 ntBASIC17.56■□□□□ 0.4
PTPN18Q99952 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.56■□□□□ 0.4
PTPN18Q99952 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.56■□□□□ 0.4
PTPN18Q99952 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC17.56■□□□□ 0.4
PTPN18Q99952 NEU3-205ENST00000531619 582 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN18Q99952 SAMD11P1-201ENST00000571429 661 ntBASIC17.56■□□□□ 0.4
PTPN18Q99952 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.56■□□□□ 0.4
PTPN18Q99952 AC092171.5-201ENST00000608012 942 ntBASIC17.56■□□□□ 0.4
PTPN18Q99952 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
PTPN18Q99952 AL805961.1-201ENST00000642026 753 ntBASIC17.56■□□□□ 0.4
PTPN18Q99952 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN18Q99952 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN18Q99952 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN18Q99952 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
PTPN18Q99952 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN18Q99952 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN18Q99952 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PTPN18Q99952 AC124067.4-201ENST00000519691 2379 ntBASIC17.55■□□□□ 0.4
PTPN18Q99952 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN18Q99952 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN18Q99952 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN18Q99952 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN18Q99952 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.55■□□□□ 0.4
PTPN18Q99952 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN18Q99952 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN18Q99952 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN18Q99952 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN18Q99952 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN18Q99952 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN18Q99952 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN18Q99952 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC17.55■□□□□ 0.4
PTPN18Q99952 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN18Q99952 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN18Q99952 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.55■□□□□ 0.4
PTPN18Q99952 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.55■□□□□ 0.4
PTPN18Q99952 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PTPN18Q99952 AGGF1P2-201ENST00000426656 2106 ntBASIC17.55■□□□□ 0.4
PTPN18Q99952 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PTPN18Q99952 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.55■□□□□ 0.4
PTPN18Q99952 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.55■□□□□ 0.4
PTPN18Q99952 DUX4L47-201ENST00000566374 394 ntBASIC17.55■□□□□ 0.4
PTPN18Q99952 MIR4754-201ENST00000582477 89 ntBASIC17.55■□□□□ 0.4
PTPN18Q99952 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.55■□□□□ 0.4
PTPN18Q99952 AL136301.1-201ENST00000615830 422 ntBASIC17.55■□□□□ 0.4
PTPN18Q99952 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms