Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATL1Q8WXF7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.3■□□□□ 0.04
ATL1Q8WXF7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATL1Q8WXF7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATL1Q8WXF7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.3■□□□□ 0.04
ATL1Q8WXF7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.3■□□□□ 0.04
ATL1Q8WXF7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.3■□□□□ 0.04
ATL1Q8WXF7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.3■□□□□ 0.04
ATL1Q8WXF7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
ATL1Q8WXF7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.3■□□□□ 0.04
ATL1Q8WXF7 AC074044.1-201ENST00000609673 707 ntBASIC15.3■□□□□ 0.04
ATL1Q8WXF7 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATL1Q8WXF7 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATL1Q8WXF7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.3■□□□□ 0.04
ATL1Q8WXF7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATL1Q8WXF7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.3■□□□□ 0.04
ATL1Q8WXF7 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ATL1Q8WXF7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATL1Q8WXF7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ATL1Q8WXF7 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
ATL1Q8WXF7 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 MIR943-201ENST00000401286 94 ntBASIC15.29■□□□□ 0.04
ATL1Q8WXF7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 AC097493.3-201ENST00000509725 367 ntBASIC15.29■□□□□ 0.04
ATL1Q8WXF7 ZNF890P-202ENST00000530367 1156 ntBASIC15.29■□□□□ 0.04
ATL1Q8WXF7 AL512361.1-201ENST00000554200 418 ntBASIC15.29■□□□□ 0.04
ATL1Q8WXF7 AC010336.2-201ENST00000564226 506 ntBASIC15.29■□□□□ 0.04
ATL1Q8WXF7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
ATL1Q8WXF7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.28■□□□□ 0.04
ATL1Q8WXF7 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.28■□□□□ 0.04
ATL1Q8WXF7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 TREML5P-201ENST00000421694 576 ntBASIC15.28■□□□□ 0.04
ATL1Q8WXF7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.28■□□□□ 0.04
ATL1Q8WXF7 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.28■□□□□ 0.04
ATL1Q8WXF7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms