Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
EFCAB3Q8N7B9 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.8■□□□□ 0.12
EFCAB3Q8N7B9 AC139749.1-202ENST00000617529 3139 ntBASIC15.8■□□□□ 0.12
EFCAB3Q8N7B9 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.8■□□□□ 0.12
EFCAB3Q8N7B9 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
EFCAB3Q8N7B9 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.8■□□□□ 0.12
EFCAB3Q8N7B9 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.8■□□□□ 0.12
EFCAB3Q8N7B9 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EFCAB3Q8N7B9 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.8■□□□□ 0.12
EFCAB3Q8N7B9 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.8■□□□□ 0.12
EFCAB3Q8N7B9 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
EFCAB3Q8N7B9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.8■□□□□ 0.12
EFCAB3Q8N7B9 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 LINC00888-202ENST00000471496 1490 ntTSL 3 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 AL445523.1-201ENST00000451184 1362 ntBASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 LIAS-204ENST00000424936 1011 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 AC067863.1-201ENST00000494933 530 ntBASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 AC137794.1-201ENST00000509185 914 ntTSL 5 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 AC016550.3-201ENST00000515706 767 ntBASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 RPL21P136-201ENST00000605378 396 ntBASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 TPT1-AS1-221ENST00000618947 520 ntTSL 3 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 AL513210.1-201ENST00000629608 234 ntBASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 GPAA1P2-202ENST00000606848 1787 ntBASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
EFCAB3Q8N7B9 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 MFSD8-213ENST00000641134 1327 ntBASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 RNU1-129P-201ENST00000384064 167 ntBASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 AL645634.1-201ENST00000418426 462 ntTSL 3 BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 AC005034.1-201ENST00000426657 489 ntBASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 HACL1-206ENST00000435217 1269 ntTSL 2 BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 ANAPC10-202ENST00000451299 928 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 AC023141.5-201ENST00000458585 616 ntBASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 AC090680.1-201ENST00000464696 860 ntBASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 RN7SKP157-201ENST00000516174 282 ntBASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 SNORA48.9-201ENST00000516419 162 ntBASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 AC068733.1-201ENST00000532430 1288 ntTSL 2 BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC15.78■□□□□ 0.12
EFCAB3Q8N7B9 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms