RNA–Protein interactions for RNA: ENST00000562065.1

LINC01243-201, Transcript of long intergenic non-protein coding RNA 1243, humanhuman

TSL 1 (best) BASIC

Gene LINC01243, Length 721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01243-201ENST00000562065 AEBP2Q6ZN18 517 aaPredicted RBP34.03■■■■□ 3.04
LINC01243-201ENST00000562065 CHIC1Q5VXU3 224 aa32.55■■■□□ 2.8
LINC01243-201ENST00000562065 SENP3Q9H4L4 574 aaPredicted RBP29.02■■■□□ 2.24
LINC01243-201ENST00000562065 PHF23Q9BUL5 403 aaPredicted RBP28.69■■■□□ 2.18
LINC01243-201ENST00000562065 FOXD1Q16676 465 aa27.01■■□□□ 1.91
LINC01243-201ENST00000562065 PLPPR3Q6T4P5 718 aa26.15■■□□□ 1.78
LINC01243-201ENST00000562065 PPP6R1Q9UPN7 881 aa25.43■■□□□ 1.66
LINC01243-201ENST00000562065 ADRA2BP18089 450 aa25.42■■□□□ 1.66
LINC01243-201ENST00000562065 PIAS4Q8N2W9 510 aaPredicted RBP25.37■■□□□ 1.65
LINC01243-201ENST00000562065 MSH5O43196 834 aa25.2■■□□□ 1.62
LINC01243-201ENST00000562065 POTEDQ86YR6 584 aa24.19■■□□□ 1.46
LINC01243-201ENST00000562065 MAPK8IP2Q13387 824 aaPredicted RBP23.27■■□□□ 1.32
LINC01243-201ENST00000562065 SCAF1Q9H7N4 1312 aaKnown RBP23.25■■□□□ 1.31
LINC01243-201ENST00000562065 DMRT2Q9Y5R5 561 aa23.02■■□□□ 1.28
LINC01243-201ENST00000562065 PPP4R3CPQ6ZMV5 832 aa22.96■■□□□ 1.27
LINC01243-201ENST00000562065 CNKSR2Q8WXI2 1034 aa22.46■■□□□ 1.19
LINC01243-201ENST00000562065 DCAF8L1A6NGE4 600 aa22.26■■□□□ 1.15
LINC01243-201ENST00000562065 HOXD11P31277 338 aaPredicted RBP22.24■■□□□ 1.15
LINC01243-201ENST00000562065 NCBP3Q53F19 620 aaKnown RBP22.18■■□□□ 1.14
LINC01243-201ENST00000562065 RNF216Q9NWF9 866 aaPredicted RBP22.17■■□□□ 1.14
LINC01243-201ENST00000562065 NPM3O75607 178 aaKnown RBP21.82■■□□□ 1.08
LINC01243-201ENST00000562065 KCNA4P22459 653 aa21.64■■□□□ 1.05
LINC01243-201ENST00000562065 CACNB1Q02641 598 aaPredicted RBP21.55■■□□□ 1.04
LINC01243-201ENST00000562065 RNF39Q9H2S5 420 aa21.49■■□□□ 1.03
LINC01243-201ENST00000562065 DNAJC5BQ9UF47 199 aa21.35■■□□□ 1.01
LINC01243-201ENST00000562065 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.34■■□□□ 1.01
LINC01243-201ENST00000562065 C1QBPQ07021 282 aaKnown RBP21.2■□□□□ 0.98
LINC01243-201ENST00000562065 U3KPZ7 1027 aaPredicted RBP20.83■□□□□ 0.93
LINC01243-201ENST00000562065 SLC4A2P04920 1241 aa20.75■□□□□ 0.91
LINC01243-201ENST00000562065 CAPN15O75808 1086 aa20.51■□□□□ 0.87
LINC01243-201ENST00000562065 SLC4A1APQ9BWU0 796 aaKnown RBP20.51■□□□□ 0.87
LINC01243-201ENST00000562065 SPINK5Q9NQ38 1064 aaPredicted RBP20.5■□□□□ 0.87
LINC01243-201ENST00000562065 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
LINC01243-201ENST00000562065 HNRNPUL2Q1KMD3 747 aaKnown RBP20.34■□□□□ 0.85
LINC01243-201ENST00000562065 APLP2Q06481 763 aa20.32■□□□□ 0.84
LINC01243-201ENST00000562065 TRHP20396 242 aaPredicted RBP20.25■□□□□ 0.83
LINC01243-201ENST00000562065 SAMD1Q6SPF0 538 aaPredicted RBP20.24■□□□□ 0.83
LINC01243-201ENST00000562065 DSG3P32926 999 aa20.23■□□□□ 0.83
LINC01243-201ENST00000562065 MYCNP04198 464 aaPredicted RBP20.19■□□□□ 0.82
LINC01243-201ENST00000562065 ZNF219Q9P2Y4 722 aaPredicted RBP20.15■□□□□ 0.82
LINC01243-201ENST00000562065 FOXD4L1Q9NU39 408 aa20.13■□□□□ 0.81
LINC01243-201ENST00000562065 ABCB7O75027 752 aa20.06■□□□□ 0.8
LINC01243-201ENST00000562065 ZBTB22O15209 634 aa19.87■□□□□ 0.77
LINC01243-201ENST00000562065 POLA2Q14181 598 aa19.69■□□□□ 0.74
LINC01243-201ENST00000562065 ATF5Q9Y2D1 282 aaPredicted RBP19.69■□□□□ 0.74
LINC01243-201ENST00000562065 ATXN8OSP0DMR3 200 aa19.41■□□□□ 0.7
LINC01243-201ENST00000562065 RBM42Q9BTD8 480 aaKnown RBP19.33■□□□□ 0.68
LINC01243-201ENST00000562065 ZBTB12Q9Y330 459 aaPredicted RBP19.3■□□□□ 0.68
LINC01243-201ENST00000562065 EHMT2Q96KQ7 1210 aa19.2■□□□□ 0.66
LINC01243-201ENST00000562065 CSRNP3Q8WYN3 585 aa19.17■□□□□ 0.66
LINC01243-201ENST00000562065 OSCARQ8IYS5 282 aa19.09■□□□□ 0.65
LINC01243-201ENST00000562065 POTEHQ6S545 545 aa19.03■□□□□ 0.64
LINC01243-201ENST00000562065 FBLN2P98095 1184 aa18.98■□□□□ 0.63
LINC01243-201ENST00000562065 AKT1S1Q96B36 256 aa18.91■□□□□ 0.62
LINC01243-201ENST00000562065 CHRDL2Q6WN34 429 aa18.81■□□□□ 0.6
LINC01243-201ENST00000562065 MKRN4PQ13434 485 aaPredicted RBP18.78■□□□□ 0.6
LINC01243-201ENST00000562065 REM2Q8IYK8 340 aaPredicted RBP18.75■□□□□ 0.59
LINC01243-201ENST00000562065 SPDYE2BA6NHP3 402 aa18.71■□□□□ 0.59
LINC01243-201ENST00000562065 SPDYE6P0CI01 402 aa18.71■□□□□ 0.59
LINC01243-201ENST00000562065 SPDYE2Q495Y8 402 aa18.71■□□□□ 0.59
LINC01243-201ENST00000562065 ZNF692Q9BU19 519 aaPredicted RBP18.58■□□□□ 0.56
LINC01243-201ENST00000562065 PITPNM1O00562 1244 aa18.56■□□□□ 0.56
LINC01243-201ENST00000562065 SSUH2Q9Y2M2 353 aa18.45■□□□□ 0.54
LINC01243-201ENST00000562065 PIP4P2Q8N4L2 257 aa18.41■□□□□ 0.54
LINC01243-201ENST00000562065 CLEC11AQ9Y240 323 aa18.4■□□□□ 0.54
LINC01243-201ENST00000562065 SPDYE1Q8NFV5 336 aaPredicted RBP18.35■□□□□ 0.53
LINC01243-201ENST00000562065 PABPN1Q86U42 306 aaKnown RBP eCLIP18.31■□□□□ 0.52
LINC01243-201ENST00000562065 FXR2P51116 673 aaKnown RBP eCLIP18.29■□□□□ 0.52
LINC01243-201ENST00000562065 PRKAR2AP13861 404 aaKnown RBP18.11■□□□□ 0.49
LINC01243-201ENST00000562065 SPDYE4A6NLX3 237 aa18.08■□□□□ 0.48
LINC01243-201ENST00000562065 HAX1O00165 279 aa18.08■□□□□ 0.48
LINC01243-201ENST00000562065 PRR29P0C7W0 189 aa18.08■□□□□ 0.48
LINC01243-201ENST00000562065 CHADLQ6NUI6 762 aa17.99■□□□□ 0.47
LINC01243-201ENST00000562065 SP7Q8TDD2 431 aaPredicted RBP17.94■□□□□ 0.46
LINC01243-201ENST00000562065 STAG3Q9UJ98 1225 aa17.83■□□□□ 0.44
LINC01243-201ENST00000562065 EVX2Q03828 476 aa17.78■□□□□ 0.44
LINC01243-201ENST00000562065 C19orf67A6NJJ6 358 aa17.71■□□□□ 0.43
LINC01243-201ENST00000562065 FARP1Q9Y4F1 1045 aaPredicted RBP17.69■□□□□ 0.42
LINC01243-201ENST00000562065 CREBZFQ9NS37 354 aa17.62■□□□□ 0.41
LINC01243-201ENST00000562065 CD44P16070 742 aaKnown RBP17.56■□□□□ 0.4
LINC01243-201ENST00000562065 PROM2Q8N271 834 aa17.55■□□□□ 0.4
LINC01243-201ENST00000562065 FKBP8Q14318 412 aa17.47■□□□□ 0.39
LINC01243-201ENST00000562065 GABBR2O75899 941 aa17.42■□□□□ 0.38
LINC01243-201ENST00000562065 ZRANB1Q9UGI0 708 aa17.36■□□□□ 0.37
LINC01243-201ENST00000562065 NPM1P06748 294 aaKnown RBP eCLIP17.35■□□□□ 0.37
LINC01243-201ENST00000562065 PAK3O75914 559 aaPredicted RBP17.29■□□□□ 0.36
LINC01243-201ENST00000562065 MNX1P50219 401 aaPredicted RBP17.29■□□□□ 0.36
LINC01243-201ENST00000562065 MIER1Q8N108 512 aa17.27■□□□□ 0.36
LINC01243-201ENST00000562065 PLEKHG5O94827 1062 aa17.25■□□□□ 0.35
LINC01243-201ENST00000562065 ZNF579Q8NAF0 562 aaKnown RBP17.23■□□□□ 0.35
LINC01243-201ENST00000562065 PLCD3Q8N3E9 789 aa17.18■□□□□ 0.34
LINC01243-201ENST00000562065 CLCN6P51797 869 aa17.16■□□□□ 0.34
LINC01243-201ENST00000562065 PHF12Q96QT6 1004 aa17.13■□□□□ 0.33
LINC01243-201ENST00000562065 TSPYL2Q9H2G4 693 aaPredicted RBP17.1■□□□□ 0.33
LINC01243-201ENST00000562065 DCBLD2Q96PD2 775 aa17.07■□□□□ 0.32
LINC01243-201ENST00000562065 GALR2O43603 387 aaPredicted RBP17.05■□□□□ 0.32
LINC01243-201ENST00000562065 POTEIP0CG38 1075 aa17.01■□□□□ 0.31
LINC01243-201ENST00000562065 FBXO3Q9UK99 471 aa16.99■□□□□ 0.31
LINC01243-201ENST00000562065 ZBTB47Q9UFB7 747 aaPredicted RBP16.98■□□□□ 0.31
LINC01243-201ENST00000562065 RASEFQ8IZ41 740 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms