RNA–Protein interactions for RNA: ENST00000516419.1

SNORA48.9-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 162 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.9-201ENST00000516419 AEBP2Q6ZN18 517 aaPredicted RBP31.38■■■□□ 2.61
SNORA48.9-201ENST00000516419 CHIC1Q5VXU3 224 aa31.01■■■□□ 2.55
SNORA48.9-201ENST00000516419 PHF23Q9BUL5 403 aaPredicted RBP27.28■■□□□ 1.96
SNORA48.9-201ENST00000516419 SENP3Q9H4L4 574 aaPredicted RBP26.62■■□□□ 1.85
SNORA48.9-201ENST00000516419 PLPPR3Q6T4P5 718 aa25.34■■□□□ 1.65
SNORA48.9-201ENST00000516419 FOXD1Q16676 465 aa24.64■■□□□ 1.54
SNORA48.9-201ENST00000516419 ADRA2BP18089 450 aa23.95■■□□□ 1.42
SNORA48.9-201ENST00000516419 PPP6R1Q9UPN7 881 aa23.95■■□□□ 1.42
SNORA48.9-201ENST00000516419 PIAS4Q8N2W9 510 aaPredicted RBP23.32■■□□□ 1.32
SNORA48.9-201ENST00000516419 MSH5O43196 834 aa22.63■■□□□ 1.21
SNORA48.9-201ENST00000516419 PPP4R3CPQ6ZMV5 832 aa22.36■■□□□ 1.17
SNORA48.9-201ENST00000516419 KCNA4P22459 653 aa22.19■■□□□ 1.14
SNORA48.9-201ENST00000516419 SCAF1Q9H7N4 1312 aaKnown RBP21.99■■□□□ 1.11
SNORA48.9-201ENST00000516419 NCBP3Q53F19 620 aaKnown RBP21.91■■□□□ 1.1
SNORA48.9-201ENST00000516419 CNKSR2Q8WXI2 1034 aa21.68■■□□□ 1.06
SNORA48.9-201ENST00000516419 MAPK8IP2Q13387 824 aaPredicted RBP21.63■■□□□ 1.05
SNORA48.9-201ENST00000516419 NPM3O75607 178 aaKnown RBP21.54■■□□□ 1.04
SNORA48.9-201ENST00000516419 DMRT2Q9Y5R5 561 aa21.3■■□□□ 1
SNORA48.9-201ENST00000516419 SLC4A1APQ9BWU0 796 aaKnown RBP21.21■□□□□ 0.99
SNORA48.9-201ENST00000516419 RNF216Q9NWF9 866 aaPredicted RBP21.17■□□□□ 0.98
SNORA48.9-201ENST00000516419 HOXD11P31277 338 aaPredicted RBP20.99■□□□□ 0.95
SNORA48.9-201ENST00000516419 EHMT2Q96KQ7 1210 aa20.95■□□□□ 0.94
SNORA48.9-201ENST00000516419 DNAJC5BQ9UF47 199 aa20.93■□□□□ 0.94
SNORA48.9-201ENST00000516419 CSRNP3Q8WYN3 585 aa20.58■□□□□ 0.89
SNORA48.9-201ENST00000516419 ZBTB22O15209 634 aa20.4■□□□□ 0.86
SNORA48.9-201ENST00000516419 FOXD4L1Q9NU39 408 aa20.36■□□□□ 0.85
SNORA48.9-201ENST00000516419 DCAF8L1A6NGE4 600 aa20.33■□□□□ 0.85
SNORA48.9-201ENST00000516419 SLC4A2P04920 1241 aa20.25■□□□□ 0.83
SNORA48.9-201ENST00000516419 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20■□□□□ 0.79
SNORA48.9-201ENST00000516419 POTEDQ86YR6 584 aa19.99■□□□□ 0.79
SNORA48.9-201ENST00000516419 MYCNP04198 464 aaPredicted RBP19.92■□□□□ 0.78
SNORA48.9-201ENST00000516419 U3KPZ7 1027 aaPredicted RBP19.7■□□□□ 0.74
SNORA48.9-201ENST00000516419 ATXN8OSP0DMR3 200 aa19.65■□□□□ 0.74
SNORA48.9-201ENST00000516419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.62■□□□□ 0.73
SNORA48.9-201ENST00000516419 HNRNPUL2Q1KMD3 747 aaKnown RBP19.62■□□□□ 0.73
SNORA48.9-201ENST00000516419 SAMD1Q6SPF0 538 aaPredicted RBP19.55■□□□□ 0.72
SNORA48.9-201ENST00000516419 RNF39Q9H2S5 420 aa19.4■□□□□ 0.7
SNORA48.9-201ENST00000516419 APLP2Q06481 763 aa19.36■□□□□ 0.69
SNORA48.9-201ENST00000516419 ATF5Q9Y2D1 282 aaPredicted RBP19.31■□□□□ 0.68
SNORA48.9-201ENST00000516419 C1QBPQ07021 282 aaKnown RBP19.22■□□□□ 0.67
SNORA48.9-201ENST00000516419 SPINK5Q9NQ38 1064 aaPredicted RBP19.04■□□□□ 0.64
SNORA48.9-201ENST00000516419 ZNF219Q9P2Y4 722 aaPredicted RBP19.03■□□□□ 0.64
SNORA48.9-201ENST00000516419 CAPN15O75808 1086 aa18.97■□□□□ 0.63
SNORA48.9-201ENST00000516419 TRHP20396 242 aaPredicted RBP18.95■□□□□ 0.62
SNORA48.9-201ENST00000516419 POLA2Q14181 598 aa18.72■□□□□ 0.59
SNORA48.9-201ENST00000516419 CACNB1Q02641 598 aaPredicted RBP18.66■□□□□ 0.58
SNORA48.9-201ENST00000516419 ABCB7O75027 752 aa18.61■□□□□ 0.57
SNORA48.9-201ENST00000516419 FKBP8Q14318 412 aa18.59■□□□□ 0.57
SNORA48.9-201ENST00000516419 DSG3P32926 999 aa18.57■□□□□ 0.56
SNORA48.9-201ENST00000516419 FBLN2P98095 1184 aa18.54■□□□□ 0.56
SNORA48.9-201ENST00000516419 MKRN4PQ13434 485 aaPredicted RBP18.51■□□□□ 0.55
SNORA48.9-201ENST00000516419 ZBTB12Q9Y330 459 aaPredicted RBP18.49■□□□□ 0.55
SNORA48.9-201ENST00000516419 SPDYE4A6NLX3 237 aa18.27■□□□□ 0.52
SNORA48.9-201ENST00000516419 OSCARQ8IYS5 282 aa18.05■□□□□ 0.48
SNORA48.9-201ENST00000516419 PROM2Q8N271 834 aa18.03■□□□□ 0.48
SNORA48.9-201ENST00000516419 SPDYE2BA6NHP3 402 aa18■□□□□ 0.47
SNORA48.9-201ENST00000516419 SPDYE6P0CI01 402 aa18■□□□□ 0.47
SNORA48.9-201ENST00000516419 SPDYE2Q495Y8 402 aa18■□□□□ 0.47
SNORA48.9-201ENST00000516419 ZNF692Q9BU19 519 aaPredicted RBP17.97■□□□□ 0.47
SNORA48.9-201ENST00000516419 FBXO3Q9UK99 471 aa17.89■□□□□ 0.45
SNORA48.9-201ENST00000516419 SSUH2Q9Y2M2 353 aa17.88■□□□□ 0.45
SNORA48.9-201ENST00000516419 PABPN1Q86U42 306 aaKnown RBP eCLIP17.72■□□□□ 0.43
SNORA48.9-201ENST00000516419 RBM42Q9BTD8 480 aaKnown RBP17.72■□□□□ 0.43
SNORA48.9-201ENST00000516419 VASPP50552 380 aaPredicted RBP17.6■□□□□ 0.41
SNORA48.9-201ENST00000516419 AKT1S1Q96B36 256 aa17.58■□□□□ 0.4
SNORA48.9-201ENST00000516419 AMER1Q5JTC6 1135 aaPredicted RBP17.56■□□□□ 0.4
SNORA48.9-201ENST00000516419 STAG3Q9UJ98 1225 aa17.56■□□□□ 0.4
SNORA48.9-201ENST00000516419 RTN4Q9NQC3 1192 aaKnown RBP17.45■□□□□ 0.38
SNORA48.9-201ENST00000516419 SPDYE1Q8NFV5 336 aaPredicted RBP17.38■□□□□ 0.37
SNORA48.9-201ENST00000516419 IFNLR1Q8IU57 520 aaPredicted RBP17.37■□□□□ 0.37
SNORA48.9-201ENST00000516419 REM2Q8IYK8 340 aaPredicted RBP17.37■□□□□ 0.37
SNORA48.9-201ENST00000516419 PLCD3Q8N3E9 789 aa17.31■□□□□ 0.36
SNORA48.9-201ENST00000516419 MIER1Q8N108 512 aa17.3■□□□□ 0.36
SNORA48.9-201ENST00000516419 CLEC11AQ9Y240 323 aa17.27■□□□□ 0.36
SNORA48.9-201ENST00000516419 KLHL34Q8N239 644 aa17.23■□□□□ 0.35
SNORA48.9-201ENST00000516419 PLEKHG5O94827 1062 aa17.22■□□□□ 0.35
SNORA48.9-201ENST00000516419 PRR29P0C7W0 189 aa17.18■□□□□ 0.34
SNORA48.9-201ENST00000516419 PITPNM1O00562 1244 aa17.17■□□□□ 0.34
SNORA48.9-201ENST00000516419 SPOCK2Q92563 424 aa17.14■□□□□ 0.33
SNORA48.9-201ENST00000516419 ZBTB47Q9UFB7 747 aaPredicted RBP17.14■□□□□ 0.33
SNORA48.9-201ENST00000516419 CREBZFQ9NS37 354 aa17.02■□□□□ 0.32
SNORA48.9-201ENST00000516419 PKD2Q13563 968 aa16.92■□□□□ 0.3
SNORA48.9-201ENST00000516419 MNX1P50219 401 aaPredicted RBP16.88■□□□□ 0.29
SNORA48.9-201ENST00000516419 NUBP1P53384 320 aa16.82■□□□□ 0.28
SNORA48.9-201ENST00000516419 CHRDL2Q6WN34 429 aa16.82■□□□□ 0.28
SNORA48.9-201ENST00000516419 FXR2P51116 673 aaKnown RBP eCLIP16.8■□□□□ 0.28
SNORA48.9-201ENST00000516419 CHADLQ6NUI6 762 aa16.8■□□□□ 0.28
SNORA48.9-201ENST00000516419 CIZ1Q9ULV3 898 aaPredicted RBP16.8■□□□□ 0.28
SNORA48.9-201ENST00000516419 NPM1P06748 294 aaKnown RBP eCLIP16.79■□□□□ 0.28
SNORA48.9-201ENST00000516419 ECM2O94769 699 aaPredicted RBP16.77■□□□□ 0.28
SNORA48.9-201ENST00000516419 GSE1Q14687 1217 aa16.75■□□□□ 0.27
SNORA48.9-201ENST00000516419 PRKAR2AP13861 404 aaKnown RBP16.74■□□□□ 0.27
SNORA48.9-201ENST00000516419 TRIM41Q8WV44 630 aa16.71■□□□□ 0.27
SNORA48.9-201ENST00000516419 FARP1Q9Y4F1 1045 aaPredicted RBP16.7■□□□□ 0.26
SNORA48.9-201ENST00000516419 DCAF8Q5TAQ9 597 aa16.69■□□□□ 0.26
SNORA48.9-201ENST00000516419 FAM212AQ96EL1 285 aa16.69■□□□□ 0.26
SNORA48.9-201ENST00000516419 PIP4P2Q8N4L2 257 aa16.68■□□□□ 0.26
SNORA48.9-201ENST00000516419 RASEFQ8IZ41 740 aa16.65■□□□□ 0.26
SNORA48.9-201ENST00000516419 DCAF8L2P0C7V8 631 aa16.63■□□□□ 0.25
SNORA48.9-201ENST00000516419 RGL2O15211 777 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms