RNA–Protein interactions for RNA: ENST00000515706.1

AC016550.3-201, humanhuman

BASIC

Gene AC016550.3, Length 767 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC016550.3-201ENST00000515706 AEBP2Q6ZN18 517 aaPredicted RBP34.5■■■■□ 3.11
AC016550.3-201ENST00000515706 CHIC1Q5VXU3 224 aa33■■■□□ 2.87
AC016550.3-201ENST00000515706 SENP3Q9H4L4 574 aaPredicted RBP29.63■■■□□ 2.33
AC016550.3-201ENST00000515706 PHF23Q9BUL5 403 aaPredicted RBP29.17■■■□□ 2.26
AC016550.3-201ENST00000515706 FOXD1Q16676 465 aa27.45■■□□□ 1.98
AC016550.3-201ENST00000515706 PLPPR3Q6T4P5 718 aa26.5■■□□□ 1.83
AC016550.3-201ENST00000515706 MSH5O43196 834 aa25.84■■□□□ 1.73
AC016550.3-201ENST00000515706 PIAS4Q8N2W9 510 aaPredicted RBP25.74■■□□□ 1.71
AC016550.3-201ENST00000515706 PPP6R1Q9UPN7 881 aa25.68■■□□□ 1.7
AC016550.3-201ENST00000515706 ADRA2BP18089 450 aa25.63■■□□□ 1.69
AC016550.3-201ENST00000515706 POTEDQ86YR6 584 aa24.87■■□□□ 1.57
AC016550.3-201ENST00000515706 SCAF1Q9H7N4 1312 aaKnown RBP23.73■■□□□ 1.39
AC016550.3-201ENST00000515706 MAPK8IP2Q13387 824 aaPredicted RBP23.47■■□□□ 1.35
AC016550.3-201ENST00000515706 DMRT2Q9Y5R5 561 aa23.46■■□□□ 1.35
AC016550.3-201ENST00000515706 PPP4R3CPQ6ZMV5 832 aa23.16■■□□□ 1.3
AC016550.3-201ENST00000515706 CNKSR2Q8WXI2 1034 aa22.78■■□□□ 1.24
AC016550.3-201ENST00000515706 HOXD11P31277 338 aaPredicted RBP22.65■■□□□ 1.22
AC016550.3-201ENST00000515706 RNF216Q9NWF9 866 aaPredicted RBP22.55■■□□□ 1.2
AC016550.3-201ENST00000515706 DCAF8L1A6NGE4 600 aa22.46■■□□□ 1.19
AC016550.3-201ENST00000515706 NCBP3Q53F19 620 aaKnown RBP22.46■■□□□ 1.19
AC016550.3-201ENST00000515706 CACNB1Q02641 598 aaPredicted RBP22.03■■□□□ 1.12
AC016550.3-201ENST00000515706 DNAJC5BQ9UF47 199 aa22■■□□□ 1.11
AC016550.3-201ENST00000515706 RNF39Q9H2S5 420 aa21.96■■□□□ 1.11
AC016550.3-201ENST00000515706 NPM3O75607 178 aaKnown RBP21.95■■□□□ 1.1
AC016550.3-201ENST00000515706 C1QBPQ07021 282 aaKnown RBP21.74■■□□□ 1.07
AC016550.3-201ENST00000515706 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.6■■□□□ 1.05
AC016550.3-201ENST00000515706 KCNA4P22459 653 aa21.56■■□□□ 1.04
AC016550.3-201ENST00000515706 U3KPZ7 1027 aaPredicted RBP21.07■□□□□ 0.96
AC016550.3-201ENST00000515706 SLC4A2P04920 1241 aa20.88■□□□□ 0.93
AC016550.3-201ENST00000515706 APLP2Q06481 763 aa20.78■□□□□ 0.92
AC016550.3-201ENST00000515706 CAPN15O75808 1086 aa20.75■□□□□ 0.91
AC016550.3-201ENST00000515706 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.74■□□□□ 0.91
AC016550.3-201ENST00000515706 HNRNPUL2Q1KMD3 747 aaKnown RBP20.74■□□□□ 0.91
AC016550.3-201ENST00000515706 SPINK5Q9NQ38 1064 aaPredicted RBP20.69■□□□□ 0.9
AC016550.3-201ENST00000515706 DSG3P32926 999 aa20.58■□□□□ 0.89
AC016550.3-201ENST00000515706 SAMD1Q6SPF0 538 aaPredicted RBP20.56■□□□□ 0.88
AC016550.3-201ENST00000515706 ZNF219Q9P2Y4 722 aaPredicted RBP20.51■□□□□ 0.87
AC016550.3-201ENST00000515706 SLC4A1APQ9BWU0 796 aaKnown RBP20.47■□□□□ 0.87
AC016550.3-201ENST00000515706 TRHP20396 242 aaPredicted RBP20.42■□□□□ 0.86
AC016550.3-201ENST00000515706 MYCNP04198 464 aaPredicted RBP20.4■□□□□ 0.86
AC016550.3-201ENST00000515706 FOXD4L1Q9NU39 408 aa20.22■□□□□ 0.83
AC016550.3-201ENST00000515706 ABCB7O75027 752 aa20.18■□□□□ 0.82
AC016550.3-201ENST00000515706 POLA2Q14181 598 aa19.91■□□□□ 0.78
AC016550.3-201ENST00000515706 RBM42Q9BTD8 480 aaKnown RBP19.8■□□□□ 0.76
AC016550.3-201ENST00000515706 ZBTB22O15209 634 aa19.75■□□□□ 0.75
AC016550.3-201ENST00000515706 ATF5Q9Y2D1 282 aaPredicted RBP19.72■□□□□ 0.75
AC016550.3-201ENST00000515706 ATXN8OSP0DMR3 200 aa19.68■□□□□ 0.74
AC016550.3-201ENST00000515706 ZBTB12Q9Y330 459 aaPredicted RBP19.68■□□□□ 0.74
AC016550.3-201ENST00000515706 POTEHQ6S545 545 aa19.56■□□□□ 0.72
AC016550.3-201ENST00000515706 AKT1S1Q96B36 256 aa19.3■□□□□ 0.68
AC016550.3-201ENST00000515706 OSCARQ8IYS5 282 aa19.22■□□□□ 0.67
AC016550.3-201ENST00000515706 FBLN2P98095 1184 aa19.19■□□□□ 0.66
AC016550.3-201ENST00000515706 CHRDL2Q6WN34 429 aa19.19■□□□□ 0.66
AC016550.3-201ENST00000515706 REM2Q8IYK8 340 aaPredicted RBP19.04■□□□□ 0.64
AC016550.3-201ENST00000515706 CSRNP3Q8WYN3 585 aa19.01■□□□□ 0.63
AC016550.3-201ENST00000515706 SPDYE2BA6NHP3 402 aa19■□□□□ 0.63
AC016550.3-201ENST00000515706 SPDYE6P0CI01 402 aa19■□□□□ 0.63
AC016550.3-201ENST00000515706 SPDYE2Q495Y8 402 aa19■□□□□ 0.63
AC016550.3-201ENST00000515706 MKRN4PQ13434 485 aaPredicted RBP18.85■□□□□ 0.61
AC016550.3-201ENST00000515706 EHMT2Q96KQ7 1210 aa18.81■□□□□ 0.6
AC016550.3-201ENST00000515706 PITPNM1O00562 1244 aa18.8■□□□□ 0.6
AC016550.3-201ENST00000515706 ZNF692Q9BU19 519 aaPredicted RBP18.76■□□□□ 0.59
AC016550.3-201ENST00000515706 PIP4P2Q8N4L2 257 aa18.72■□□□□ 0.59
AC016550.3-201ENST00000515706 SSUH2Q9Y2M2 353 aa18.69■□□□□ 0.58
AC016550.3-201ENST00000515706 FXR2P51116 673 aaKnown RBP eCLIP18.67■□□□□ 0.58
AC016550.3-201ENST00000515706 SPDYE1Q8NFV5 336 aaPredicted RBP18.65■□□□□ 0.58
AC016550.3-201ENST00000515706 CLEC11AQ9Y240 323 aa18.53■□□□□ 0.56
AC016550.3-201ENST00000515706 PABPN1Q86U42 306 aaKnown RBP eCLIP18.44■□□□□ 0.54
AC016550.3-201ENST00000515706 SP7Q8TDD2 431 aaPredicted RBP18.41■□□□□ 0.54
AC016550.3-201ENST00000515706 HAX1O00165 279 aa18.4■□□□□ 0.54
AC016550.3-201ENST00000515706 PRKAR2AP13861 404 aaKnown RBP18.35■□□□□ 0.53
AC016550.3-201ENST00000515706 PRR29P0C7W0 189 aa18.31■□□□□ 0.52
AC016550.3-201ENST00000515706 SPDYE4A6NLX3 237 aa18.13■□□□□ 0.49
AC016550.3-201ENST00000515706 STAG3Q9UJ98 1225 aa18.12■□□□□ 0.49
AC016550.3-201ENST00000515706 CHADLQ6NUI6 762 aa18.08■□□□□ 0.48
AC016550.3-201ENST00000515706 C19orf67A6NJJ6 358 aa18.06■□□□□ 0.48
AC016550.3-201ENST00000515706 EVX2Q03828 476 aa18.01■□□□□ 0.47
AC016550.3-201ENST00000515706 FARP1Q9Y4F1 1045 aaPredicted RBP17.93■□□□□ 0.46
AC016550.3-201ENST00000515706 CD44P16070 742 aaKnown RBP17.79■□□□□ 0.44
AC016550.3-201ENST00000515706 CREBZFQ9NS37 354 aa17.78■□□□□ 0.44
AC016550.3-201ENST00000515706 CLCN6P51797 869 aa17.76■□□□□ 0.43
AC016550.3-201ENST00000515706 GABBR2O75899 941 aa17.75■□□□□ 0.43
AC016550.3-201ENST00000515706 PROM2Q8N271 834 aa17.69■□□□□ 0.42
AC016550.3-201ENST00000515706 NPM1P06748 294 aaKnown RBP eCLIP17.62■□□□□ 0.41
AC016550.3-201ENST00000515706 PAK3O75914 559 aaPredicted RBP17.57■□□□□ 0.4
AC016550.3-201ENST00000515706 ZRANB1Q9UGI0 708 aa17.55■□□□□ 0.4
AC016550.3-201ENST00000515706 ZNF579Q8NAF0 562 aaKnown RBP17.54■□□□□ 0.4
AC016550.3-201ENST00000515706 MNX1P50219 401 aaPredicted RBP17.47■□□□□ 0.39
AC016550.3-201ENST00000515706 PLEKHG5O94827 1062 aa17.45■□□□□ 0.38
AC016550.3-201ENST00000515706 DCBLD2Q96PD2 775 aa17.38■□□□□ 0.37
AC016550.3-201ENST00000515706 MIER1Q8N108 512 aa17.31■□□□□ 0.36
AC016550.3-201ENST00000515706 POTEIP0CG38 1075 aa17.28■□□□□ 0.36
AC016550.3-201ENST00000515706 FKBP8Q14318 412 aa17.28■□□□□ 0.36
AC016550.3-201ENST00000515706 LHX8Q68G74 356 aa17.26■□□□□ 0.35
AC016550.3-201ENST00000515706 GALR2O43603 387 aaPredicted RBP17.23■□□□□ 0.35
AC016550.3-201ENST00000515706 PHF12Q96QT6 1004 aa17.23■□□□□ 0.35
AC016550.3-201ENST00000515706 ZBTB47Q9UFB7 747 aaPredicted RBP17.21■□□□□ 0.35
AC016550.3-201ENST00000515706 PLCD3Q8N3E9 789 aa17.19■□□□□ 0.34
AC016550.3-201ENST00000515706 TSPYL2Q9H2G4 693 aaPredicted RBP17.15■□□□□ 0.34
AC016550.3-201ENST00000515706 CCDC61Q9Y6R9 512 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms