Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 FAM90A23P-201ENST00000400136 1395 ntBASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 AL512430.1-201ENST00000392575 860 ntBASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 RN7SKP175-201ENST00000408472 289 ntBASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 AC026410.1-201ENST00000507366 1101 ntBASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 AL136295.7-201ENST00000619226 1200 ntBASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 AC136759.1-202ENST00000530858 2194 ntBASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PTF1AQ7RTS3 AC020910.5-201ENST00000623668 1865 ntBASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 SHC1P1-201ENST00000425230 1745 ntBASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 RPL7P35-201ENST00000446943 740 ntBASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 SCARNA21-201ENST00000517026 139 ntBASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 DUX4L47-201ENST00000566374 394 ntBASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 DUX4L46-201ENST00000566845 751 ntBASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 MIR3677-201ENST00000578964 60 ntBASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PTF1AQ7RTS3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 HPGD-203ENST00000422112 805 ntTSL 2 BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 SAMD11P1-201ENST00000571429 661 ntBASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 AC008805.1-201ENST00000590892 364 ntBASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PTF1AQ7RTS3 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PTF1AQ7RTS3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PTF1AQ7RTS3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC19.58■□□□□ 0.73
PTF1AQ7RTS3 AC020916.1-201ENST00000587762 1774 ntBASIC19.58■□□□□ 0.73
PTF1AQ7RTS3 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC19.58■□□□□ 0.72
PTF1AQ7RTS3 MIR648-201ENST00000385046 94 ntBASIC19.58■□□□□ 0.72
PTF1AQ7RTS3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTF1AQ7RTS3 STUB1-204ENST00000564370 875 ntTSL 2 BASIC19.58■□□□□ 0.72
PTF1AQ7RTS3 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PTF1AQ7RTS3 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC19.58■□□□□ 0.72
PTF1AQ7RTS3 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC19.58■□□□□ 0.72
PTF1AQ7RTS3 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PTF1AQ7RTS3 RPL35-206ENST00000629845 340 ntTSL 5 BASIC19.58■□□□□ 0.72
PTF1AQ7RTS3 AC002472.3-201ENST00000640124 621 ntBASIC19.58■□□□□ 0.72
PTF1AQ7RTS3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.58■□□□□ 0.72
PTF1AQ7RTS3 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms