Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.31■□□□□ 0.2
RFWD3Q6PCD5 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 AL391825.1-201ENST00000457671 1364 ntBASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 DGCR5-201ENST00000399539 862 ntBASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 WASH4P-201ENST00000564273 1246 ntBASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 AC027307.3-201ENST00000594262 1100 ntBASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
RFWD3Q6PCD5 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 AC087499.6-201ENST00000411576 835 ntBASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 AC098850.1-201ENST00000419919 790 ntBASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 RN7SL692P-201ENST00000464677 288 ntBASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 AC005225.4-201ENST00000557330 545 ntBASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 AL596325.1-201ENST00000563991 1082 ntBASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 CECR7-204ENST00000609932 568 ntTSL 2 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 AC012645.4-201ENST00000610691 1061 ntBASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RFWD3Q6PCD5 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms