Protein–RNA interactions for Protein: Q6A163

KRT39, Keratin, type I cytoskeletal 39, humanhuman

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39Q6A163 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.85■□□□□ 0.29
KRT39Q6A163 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.85■□□□□ 0.29
KRT39Q6A163 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.85■□□□□ 0.29
KRT39Q6A163 AL158212.4-201ENST00000624062 1286 ntBASIC16.85■□□□□ 0.29
KRT39Q6A163 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
KRT39Q6A163 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT39Q6A163 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT39Q6A163 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT39Q6A163 AC063926.3-201ENST00000624734 5658 ntBASIC16.85■□□□□ 0.29
KRT39Q6A163 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
KRT39Q6A163 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KRT39Q6A163 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT39Q6A163 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.85■□□□□ 0.29
KRT39Q6A163 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.85■□□□□ 0.29
KRT39Q6A163 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT39Q6A163 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.85■□□□□ 0.29
KRT39Q6A163 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
KRT39Q6A163 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
KRT39Q6A163 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
KRT39Q6A163 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT39Q6A163 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT39Q6A163 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
KRT39Q6A163 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT39Q6A163 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
KRT39Q6A163 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT39Q6A163 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT39Q6A163 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT39Q6A163 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
KRT39Q6A163 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT39Q6A163 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT39Q6A163 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT39Q6A163 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT39Q6A163 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
KRT39Q6A163 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT39Q6A163 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT39Q6A163 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT39Q6A163 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT39Q6A163 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT39Q6A163 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT39Q6A163 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT39Q6A163 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT39Q6A163 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT39Q6A163 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
KRT39Q6A163 AL391069.4-201ENST00000609583 481 ntBASIC16.84■□□□□ 0.29
KRT39Q6A163 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.84■□□□□ 0.29
KRT39Q6A163 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
KRT39Q6A163 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
KRT39Q6A163 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
KRT39Q6A163 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT39Q6A163 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
KRT39Q6A163 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.84■□□□□ 0.29
KRT39Q6A163 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.84■□□□□ 0.29
KRT39Q6A163 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
KRT39Q6A163 AC148477.4-201ENST00000613430 1793 ntBASIC16.84■□□□□ 0.29
KRT39Q6A163 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
KRT39Q6A163 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
KRT39Q6A163 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.83■□□□□ 0.29
KRT39Q6A163 AC068587.6-202ENST00000641839 5619 ntBASIC16.83■□□□□ 0.29
KRT39Q6A163 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
KRT39Q6A163 LINC00554-201ENST00000564841 3011 ntBASIC16.83■□□□□ 0.29
KRT39Q6A163 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
KRT39Q6A163 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
KRT39Q6A163 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
KRT39Q6A163 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT39Q6A163 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT39Q6A163 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT39Q6A163 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT39Q6A163 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.83■□□□□ 0.28
KRT39Q6A163 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT39Q6A163 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT39Q6A163 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT39Q6A163 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT39Q6A163 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT39Q6A163 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT39Q6A163 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.83■□□□□ 0.28
KRT39Q6A163 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.83■□□□□ 0.28
KRT39Q6A163 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT39Q6A163 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.83■□□□□ 0.28
KRT39Q6A163 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
KRT39Q6A163 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT39Q6A163 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT39Q6A163 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT39Q6A163 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
KRT39Q6A163 DOC2GP-202ENST00000514950 1163 ntBASIC16.83■□□□□ 0.28
KRT39Q6A163 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT39Q6A163 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT39Q6A163 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.83■□□□□ 0.28
KRT39Q6A163 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.83■□□□□ 0.28
KRT39Q6A163 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.83■□□□□ 0.28
KRT39Q6A163 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT39Q6A163 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT39Q6A163 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.83■□□□□ 0.28
KRT39Q6A163 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT39Q6A163 AC004790.1-201ENST00000612686 536 ntBASIC16.83■□□□□ 0.28
KRT39Q6A163 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.83■□□□□ 0.28
KRT39Q6A163 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
KRT39Q6A163 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT39Q6A163 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
KRT39Q6A163 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
KRT39Q6A163 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms