Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 AC007541.1-201ENST00000570282 1469 ntBASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 AC067930.6-201ENST00000623257 4947 ntBASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 AC022532.1-201ENST00000624563 1728 ntBASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
HERC4Q5GLZ8 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 AC013268.4-201ENST00000637413 2228 ntBASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 MIR658-201ENST00000385210 100 ntBASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 AL109936.8-201ENST00000641772 604 ntBASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.46■□□□□ 0.39
HERC4Q5GLZ8 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HERC4Q5GLZ8 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
HERC4Q5GLZ8 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 AL512384.1-201ENST00000406683 331 ntBASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 SDHAP3-202ENST00000515467 728 ntBASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 AL844908.2-201ENST00000609461 460 ntBASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 AC011270.2-201ENST00000624293 2550 ntBASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 AC126177.1-201ENST00000547829 2218 ntBASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
HERC4Q5GLZ8 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms