Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 LINC00552-201ENST00000625151 2579 ntBASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
KHDC1Q4VXA5 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 AC004987.2-201ENST00000395959 1148 ntBASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 AL512361.1-201ENST00000554200 418 ntBASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 AC243562.2-201ENST00000561247 970 ntBASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 AL844908.2-201ENST00000609461 460 ntBASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 AC018892.3-201ENST00000623986 2499 ntBASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
KHDC1Q4VXA5 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 AP001282.1-201ENST00000531301 1499 ntBASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 EEF1DP4-201ENST00000446006 880 ntBASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
KHDC1Q4VXA5 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms