Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 AP002469.2-201ENST00000531724 424 ntBASIC16.61■□□□□ 0.25
ERCC6LQ2NKX8 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.61■□□□□ 0.25
ERCC6LQ2NKX8 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.61■□□□□ 0.25
ERCC6LQ2NKX8 PPT1-213ENST00000641319 2388 ntBASIC16.61■□□□□ 0.25
ERCC6LQ2NKX8 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC6LQ2NKX8 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ERCC6LQ2NKX8 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.61■□□□□ 0.25
ERCC6LQ2NKX8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC6LQ2NKX8 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC6LQ2NKX8 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC6LQ2NKX8 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ERCC6LQ2NKX8 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.61■□□□□ 0.25
ERCC6LQ2NKX8 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 MIR5100-201ENST00000579544 119 ntBASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 AC069148.1-201ENST00000608741 768 ntBASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 KRT18P1-202ENST00000452408 1331 ntBASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC16.6■□□□□ 0.25
ERCC6LQ2NKX8 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 RNU1-129P-201ENST00000384064 167 ntBASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 TOB2P1-201ENST00000469761 992 ntBASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 TPSP2-201ENST00000561760 610 ntBASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 AC139887.3-201ENST00000568585 713 ntBASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 U1.21-201ENST00000580816 167 ntBASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 AL805961.1-202ENST00000641562 540 ntBASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 Z82170.1-201ENST00000625081 3192 ntBASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.59■□□□□ 0.25
ERCC6LQ2NKX8 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms