Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.79□□□□□ -0.04
RAE1P78406 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.79□□□□□ -0.04
RAE1P78406 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 AC004461.2-201ENST00000629517 803 ntBASIC14.79□□□□□ -0.04
RAE1P78406 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RAE1P78406 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.79□□□□□ -0.04
RAE1P78406 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RAE1P78406 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.79□□□□□ -0.04
RAE1P78406 AL513477.1-201ENST00000602865 2407 ntBASIC14.78□□□□□ -0.04
RAE1P78406 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAE1P78406 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
RAE1P78406 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.78□□□□□ -0.04
RAE1P78406 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAE1P78406 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RAE1P78406 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAE1P78406 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAE1P78406 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAE1P78406 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RAE1P78406 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAE1P78406 LINC01101-201ENST00000622953 1884 ntBASIC14.78□□□□□ -0.04
RAE1P78406 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.78□□□□□ -0.04
RAE1P78406 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.78□□□□□ -0.04
RAE1P78406 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAE1P78406 AC099063.4-201ENST00000641099 1602 ntBASIC14.78□□□□□ -0.04
RAE1P78406 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
RAE1P78406 AC138969.3-201ENST00000546612 1459 ntBASIC14.78□□□□□ -0.04
RAE1P78406 AC138932.2-201ENST00000548268 1459 ntBASIC14.78□□□□□ -0.04
RAE1P78406 AC126755.4-201ENST00000549796 1459 ntBASIC14.78□□□□□ -0.04
RAE1P78406 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAE1P78406 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RAE1P78406 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAE1P78406 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.78□□□□□ -0.04
RAE1P78406 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAE1P78406 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAE1P78406 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RAE1P78406 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAE1P78406 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RAE1P78406 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAE1P78406 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.78□□□□□ -0.04
RAE1P78406 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.78□□□□□ -0.04
RAE1P78406 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.78□□□□□ -0.04
RAE1P78406 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
RAE1P78406 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.78□□□□□ -0.04
RAE1P78406 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.78□□□□□ -0.04
RAE1P78406 AC009407.1-201ENST00000568958 598 ntBASIC14.78□□□□□ -0.04
RAE1P78406 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
RAE1P78406 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.78□□□□□ -0.04
RAE1P78406 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.78□□□□□ -0.04
RAE1P78406 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.78□□□□□ -0.04
RAE1P78406 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAE1P78406 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RAE1P78406 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.78□□□□□ -0.04
RAE1P78406 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAE1P78406 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAE1P78406 AC013726.1-201ENST00000563747 2285 ntBASIC14.78□□□□□ -0.04
RAE1P78406 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
RAE1P78406 AC106881.1-201ENST00000605849 3329 ntBASIC14.78□□□□□ -0.04
RAE1P78406 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RAE1P78406 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAE1P78406 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAE1P78406 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAE1P78406 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.78□□□□□ -0.04
RAE1P78406 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
RAE1P78406 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAE1P78406 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.78□□□□□ -0.04
RAE1P78406 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.78□□□□□ -0.04
RAE1P78406 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
RAE1P78406 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAE1P78406 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RAE1P78406 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAE1P78406 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAE1P78406 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAE1P78406 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAE1P78406 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAE1P78406 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAE1P78406 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAE1P78406 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RAE1P78406 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAE1P78406 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.77□□□□□ -0.04
RAE1P78406 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.77□□□□□ -0.04
RAE1P78406 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAE1P78406 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAE1P78406 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
RAE1P78406 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.77□□□□□ -0.05
RAE1P78406 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.77□□□□□ -0.05
RAE1P78406 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.77□□□□□ -0.05
RAE1P78406 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAE1P78406 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.77□□□□□ -0.05
RAE1P78406 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.77□□□□□ -0.05
RAE1P78406 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.77□□□□□ -0.05
RAE1P78406 AC114501.2-201ENST00000439631 535 ntBASIC14.77□□□□□ -0.05
RAE1P78406 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.77□□□□□ -0.05
RAE1P78406 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.77□□□□□ -0.05
RAE1P78406 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms