Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
SKP1P63208 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
SKP1P63208 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SKP1P63208 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.86□□□□□ -0.03
SKP1P63208 RPL5P21-201ENST00000404620 815 ntBASIC14.86□□□□□ -0.03
SKP1P63208 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.86□□□□□ -0.03
SKP1P63208 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.86□□□□□ -0.03
SKP1P63208 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.86□□□□□ -0.03
SKP1P63208 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.86□□□□□ -0.03
SKP1P63208 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.86□□□□□ -0.03
SKP1P63208 AC015910.1-201ENST00000579400 975 ntBASIC14.86□□□□□ -0.03
SKP1P63208 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SKP1P63208 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.86□□□□□ -0.03
SKP1P63208 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
SKP1P63208 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
SKP1P63208 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SKP1P63208 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.86□□□□□ -0.03
SKP1P63208 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SKP1P63208 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
SKP1P63208 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
SKP1P63208 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.86□□□□□ -0.03
SKP1P63208 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
SKP1P63208 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
SKP1P63208 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
SKP1P63208 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
SKP1P63208 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.85□□□□□ -0.03
SKP1P63208 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.85□□□□□ -0.03
SKP1P63208 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.85□□□□□ -0.03
SKP1P63208 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
SKP1P63208 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.85□□□□□ -0.03
SKP1P63208 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
SKP1P63208 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
SKP1P63208 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
SKP1P63208 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
SKP1P63208 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 AC007541.1-201ENST00000570282 1469 ntBASIC14.85□□□□□ -0.03
SKP1P63208 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
SKP1P63208 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.85□□□□□ -0.03
SKP1P63208 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.85□□□□□ -0.03
SKP1P63208 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.85□□□□□ -0.03
SKP1P63208 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.85□□□□□ -0.03
SKP1P63208 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.85□□□□□ -0.03
SKP1P63208 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.85□□□□□ -0.03
SKP1P63208 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.85□□□□□ -0.03
SKP1P63208 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.85□□□□□ -0.03
SKP1P63208 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.85□□□□□ -0.03
SKP1P63208 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.85□□□□□ -0.03
SKP1P63208 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.85□□□□□ -0.03
SKP1P63208 AC093726.1-201ENST00000608064 963 ntBASIC14.85□□□□□ -0.03
SKP1P63208 AF228730.6-201ENST00000641497 218 ntBASIC14.85□□□□□ -0.03
SKP1P63208 AC084121.3-201ENST00000641716 218 ntBASIC14.85□□□□□ -0.03
SKP1P63208 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.85□□□□□ -0.03
SKP1P63208 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
SKP1P63208 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.85□□□□□ -0.03
SKP1P63208 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
SKP1P63208 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.85□□□□□ -0.03
SKP1P63208 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.85□□□□□ -0.03
SKP1P63208 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.84□□□□□ -0.03
SKP1P63208 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SKP1P63208 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
SKP1P63208 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.84□□□□□ -0.03
SKP1P63208 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SKP1P63208 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SKP1P63208 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SKP1P63208 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
SKP1P63208 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.84□□□□□ -0.03
SKP1P63208 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SKP1P63208 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.84□□□□□ -0.03
SKP1P63208 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SKP1P63208 AL121723.1-201ENST00000445194 1519 ntBASIC14.84□□□□□ -0.03
SKP1P63208 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.84□□□□□ -0.03
SKP1P63208 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
SKP1P63208 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
SKP1P63208 SPDYE18-201ENST00000510091 1050 ntBASIC14.84□□□□□ -0.03
SKP1P63208 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SKP1P63208 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SKP1P63208 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.84□□□□□ -0.03
SKP1P63208 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SKP1P63208 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
SKP1P63208 AC140912.1-201ENST00000577171 1054 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms