Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC107918.2-201ENST00000530817 355 ntBASIC13.59□□□□□ -0.23
UBA52P62987 AL512356.2-201ENST00000546955 174 ntBASIC13.59□□□□□ -0.23
UBA52P62987 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.59□□□□□ -0.23
UBA52P62987 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.59□□□□□ -0.23
UBA52P62987 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
UBA52P62987 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.59□□□□□ -0.23
UBA52P62987 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.59□□□□□ -0.23
UBA52P62987 AL135744.1-201ENST00000565098 629 ntBASIC13.59□□□□□ -0.23
UBA52P62987 RARRES2P8-201ENST00000566335 367 ntBASIC13.59□□□□□ -0.23
UBA52P62987 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC13.59□□□□□ -0.23
UBA52P62987 AC005840.4-201ENST00000541242 2494 ntBASIC13.59□□□□□ -0.23
UBA52P62987 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.59□□□□□ -0.23
UBA52P62987 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.59□□□□□ -0.23
UBA52P62987 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 AKAP8P1-201ENST00000434743 1349 ntBASIC13.59□□□□□ -0.23
UBA52P62987 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UBA52P62987 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.59□□□□□ -0.23
UBA52P62987 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.59□□□□□ -0.23
UBA52P62987 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
UBA52P62987 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
UBA52P62987 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
UBA52P62987 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
UBA52P62987 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC13.58□□□□□ -0.23
UBA52P62987 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
UBA52P62987 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
UBA52P62987 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.58□□□□□ -0.24
UBA52P62987 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.58□□□□□ -0.24
UBA52P62987 AC055876.3-201ENST00000431496 288 ntBASIC13.58□□□□□ -0.24
UBA52P62987 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.58□□□□□ -0.24
UBA52P62987 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.58□□□□□ -0.24
UBA52P62987 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.58□□□□□ -0.24
UBA52P62987 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 AC051619.7-201ENST00000568314 623 ntBASIC13.58□□□□□ -0.24
UBA52P62987 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.58□□□□□ -0.24
UBA52P62987 AC138649.4-201ENST00000612222 287 ntBASIC13.58□□□□□ -0.24
UBA52P62987 AP001059.3-201ENST00000619053 235 ntBASIC13.58□□□□□ -0.24
UBA52P62987 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.58□□□□□ -0.24
UBA52P62987 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.58□□□□□ -0.24
UBA52P62987 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 AC087481.3-201ENST00000602886 1894 ntBASIC13.58□□□□□ -0.24
UBA52P62987 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.58□□□□□ -0.24
UBA52P62987 AC013726.1-201ENST00000563747 2285 ntBASIC13.58□□□□□ -0.24
UBA52P62987 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
UBA52P62987 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
UBA52P62987 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.58□□□□□ -0.24
UBA52P62987 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
UBA52P62987 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
UBA52P62987 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 TUBB3P1-201ENST00000405796 1332 ntBASIC13.58□□□□□ -0.24
UBA52P62987 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
UBA52P62987 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
UBA52P62987 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
UBA52P62987 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
UBA52P62987 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
UBA52P62987 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UBA52P62987 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.57□□□□□ -0.24
UBA52P62987 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.57□□□□□ -0.24
UBA52P62987 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.57□□□□□ -0.24
UBA52P62987 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBA52P62987 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
UBA52P62987 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBA52P62987 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
UBA52P62987 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBA52P62987 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBA52P62987 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBA52P62987 AL359183.1-201ENST00000623796 2132 ntBASIC13.57□□□□□ -0.24
UBA52P62987 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBA52P62987 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBA52P62987 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBA52P62987 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBA52P62987 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
UBA52P62987 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
UBA52P62987 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
UBA52P62987 AC041040.2-201ENST00000622926 2899 ntBASIC13.57□□□□□ -0.24
UBA52P62987 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
UBA52P62987 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms