Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.24□□□□□ -0.45
RAB5BP61020 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.24□□□□□ -0.45
RAB5BP61020 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.23□□□□□ -0.45
RAB5BP61020 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.23□□□□□ -0.45
RAB5BP61020 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.23□□□□□ -0.45
RAB5BP61020 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.23□□□□□ -0.45
RAB5BP61020 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.23□□□□□ -0.45
RAB5BP61020 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 TP73-209ENST00000603362 1668 ntTSL 5 BASIC12.23□□□□□ -0.45
RAB5BP61020 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 KRT8P49-201ENST00000604166 1432 ntBASIC12.23□□□□□ -0.45
RAB5BP61020 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC12.23□□□□□ -0.45
RAB5BP61020 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC12.23□□□□□ -0.45
RAB5BP61020 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC12.23□□□□□ -0.45
RAB5BP61020 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 AL138781.1-201ENST00000566567 1274 ntBASIC12.23□□□□□ -0.45
RAB5BP61020 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC12.23□□□□□ -0.45
RAB5BP61020 AC083880.1-201ENST00000608266 535 ntBASIC12.23□□□□□ -0.45
RAB5BP61020 AC110285.5-201ENST00000611501 352 ntBASIC12.23□□□□□ -0.45
RAB5BP61020 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
RAB5BP61020 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
RAB5BP61020 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.23□□□□□ -0.45
RAB5BP61020 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 CLPX-201ENST00000300107 4695 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 AP001267.2-201ENST00000532619 2086 ntBASIC12.23□□□□□ -0.45
RAB5BP61020 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
RAB5BP61020 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RAB5BP61020 POM121L4P-202ENST00000427789 1891 ntBASIC12.23□□□□□ -0.45
RAB5BP61020 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
RAB5BP61020 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.23□□□□□ -0.45
RAB5BP61020 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
RAB5BP61020 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB5BP61020 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB5BP61020 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
RAB5BP61020 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
RAB5BP61020 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB5BP61020 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 AC015802.1-201ENST00000588104 1449 ntBASIC12.22□□□□□ -0.45
RAB5BP61020 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB5BP61020 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 ALK-205ENST00000618119 4646 ntTSL 5 BASIC12.22□□□□□ -0.45
RAB5BP61020 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
RAB5BP61020 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC12.22□□□□□ -0.45
RAB5BP61020 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB5BP61020 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
RAB5BP61020 PVRIG2P-201ENST00000435460 978 ntBASIC12.22□□□□□ -0.45
RAB5BP61020 GUSBP6-202ENST00000438529 1198 ntBASIC12.22□□□□□ -0.45
RAB5BP61020 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC12.22□□□□□ -0.45
RAB5BP61020 AC098934.4-201ENST00000564127 592 ntBASIC12.22□□□□□ -0.45
RAB5BP61020 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB5BP61020 AC010654.1-201ENST00000615722 808 ntBASIC12.22□□□□□ -0.45
RAB5BP61020 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
RAB5BP61020 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB5BP61020 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
RAB5BP61020 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB5BP61020 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB5BP61020 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.22□□□□□ -0.45
RAB5BP61020 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB5BP61020 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC12.22□□□□□ -0.45
RAB5BP61020 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.22□□□□□ -0.45
RAB5BP61020 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RAB5BP61020 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms