Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
CDH11P55287 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH11P55287 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CDH11P55287 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
CDH11P55287 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH11P55287 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.39□□□□□ -0.11
CDH11P55287 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH11P55287 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDH11P55287 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CDH11P55287 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDH11P55287 AC092474.2-201ENST00000424288 719 ntBASIC14.39□□□□□ -0.11
CDH11P55287 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH11P55287 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.39□□□□□ -0.11
CDH11P55287 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH11P55287 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH11P55287 AC067863.1-201ENST00000494933 530 ntBASIC14.39□□□□□ -0.11
CDH11P55287 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CDH11P55287 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.39□□□□□ -0.11
CDH11P55287 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.39□□□□□ -0.11
CDH11P55287 KRT8P23-201ENST00000560090 1207 ntBASIC14.39□□□□□ -0.11
CDH11P55287 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CDH11P55287 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CDH11P55287 Z92544.3-201ENST00000624747 417 ntBASIC14.39□□□□□ -0.11
CDH11P55287 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.39□□□□□ -0.11
CDH11P55287 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.39□□□□□ -0.11
CDH11P55287 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH11P55287 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDH11P55287 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.39□□□□□ -0.11
CDH11P55287 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH11P55287 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CDH11P55287 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.39□□□□□ -0.11
CDH11P55287 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CDH11P55287 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CDH11P55287 AC007292.2-201ENST00000593524 1812 ntBASIC14.38□□□□□ -0.11
CDH11P55287 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH11P55287 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDH11P55287 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDH11P55287 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CDH11P55287 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.38□□□□□ -0.11
CDH11P55287 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.38□□□□□ -0.11
CDH11P55287 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CDH11P55287 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.38□□□□□ -0.11
CDH11P55287 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
CDH11P55287 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH11P55287 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.38□□□□□ -0.11
CDH11P55287 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.38□□□□□ -0.11
CDH11P55287 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.38□□□□□ -0.11
CDH11P55287 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH11P55287 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.38□□□□□ -0.11
CDH11P55287 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.38□□□□□ -0.11
CDH11P55287 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH11P55287 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH11P55287 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.38□□□□□ -0.11
CDH11P55287 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CDH11P55287 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.38□□□□□ -0.11
CDH11P55287 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 CICP23-201ENST00000605013 2741 ntBASIC14.38□□□□□ -0.11
CDH11P55287 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.38□□□□□ -0.11
CDH11P55287 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.38□□□□□ -0.11
CDH11P55287 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.38□□□□□ -0.11
CDH11P55287 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CDH11P55287 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
CDH11P55287 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CDH11P55287 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.38□□□□□ -0.11
CDH11P55287 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH11P55287 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CDH11P55287 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH11P55287 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH11P55287 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH11P55287 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH11P55287 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH11P55287 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH11P55287 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.37□□□□□ -0.11
CDH11P55287 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CDH11P55287 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CDH11P55287 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CDH11P55287 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CDH11P55287 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms