Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NKX2-5P52952 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 AL355802.2-201ENST00000402069 882 ntBASIC13.29□□□□□ -0.28
NKX2-5P52952 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.29□□□□□ -0.28
NKX2-5P52952 CRYGFP-201ENST00000418459 633 ntBASIC13.29□□□□□ -0.28
NKX2-5P52952 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
NKX2-5P52952 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.29□□□□□ -0.28
NKX2-5P52952 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.29□□□□□ -0.28
NKX2-5P52952 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.29□□□□□ -0.28
NKX2-5P52952 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC13.29□□□□□ -0.28
NKX2-5P52952 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
NKX2-5P52952 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.29□□□□□ -0.28
NKX2-5P52952 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
NKX2-5P52952 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.29□□□□□ -0.28
NKX2-5P52952 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.29□□□□□ -0.28
NKX2-5P52952 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC13.29□□□□□ -0.28
NKX2-5P52952 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
NKX2-5P52952 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC13.29□□□□□ -0.28
NKX2-5P52952 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
NKX2-5P52952 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
NKX2-5P52952 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
NKX2-5P52952 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NKX2-5P52952 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC13.28□□□□□ -0.28
NKX2-5P52952 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-5P52952 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX2-5P52952 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-5P52952 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-5P52952 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-5P52952 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-5P52952 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-5P52952 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-5P52952 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-5P52952 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-5P52952 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-5P52952 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-5P52952 ESRRAP1-201ENST00000400596 1257 ntBASIC13.28□□□□□ -0.28
NKX2-5P52952 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.28□□□□□ -0.28
NKX2-5P52952 AL353807.1-201ENST00000427475 662 ntBASIC13.28□□□□□ -0.28
NKX2-5P52952 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-5P52952 NUS1P1-201ENST00000446295 882 ntBASIC13.28□□□□□ -0.28
NKX2-5P52952 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX2-5P52952 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX2-5P52952 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.28□□□□□ -0.28
NKX2-5P52952 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC13.28□□□□□ -0.28
NKX2-5P52952 AC008403.3-201ENST00000598924 454 ntBASIC13.28□□□□□ -0.28
NKX2-5P52952 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
NKX2-5P52952 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-5P52952 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
NKX2-5P52952 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
NKX2-5P52952 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-5P52952 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
NKX2-5P52952 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-5P52952 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-5P52952 TOP3BP1-201ENST00000420768 1380 ntBASIC13.28□□□□□ -0.28
NKX2-5P52952 AC243591.1-201ENST00000452967 1364 ntBASIC13.28□□□□□ -0.28
NKX2-5P52952 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.28□□□□□ -0.28
NKX2-5P52952 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-5P52952 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX2-5P52952 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.28□□□□□ -0.28
NKX2-5P52952 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
NKX2-5P52952 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-5P52952 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-5P52952 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.28□□□□□ -0.28
NKX2-5P52952 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.28□□□□□ -0.28
NKX2-5P52952 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-5P52952 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC13.28□□□□□ -0.28
NKX2-5P52952 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
NKX2-5P52952 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
NKX2-5P52952 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX2-5P52952 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-5P52952 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.28□□□□□ -0.28
NKX2-5P52952 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NKX2-5P52952 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
NKX2-5P52952 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
NKX2-5P52952 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NKX2-5P52952 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
NKX2-5P52952 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
NKX2-5P52952 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
NKX2-5P52952 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NKX2-5P52952 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
NKX2-5P52952 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
NKX2-5P52952 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.27□□□□□ -0.28
NKX2-5P52952 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
NKX2-5P52952 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms