Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC14.28□□□□□ -0.12
SSR4P51571 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.28□□□□□ -0.12
SSR4P51571 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSR4P51571 AC025181.2-201ENST00000606994 802 ntBASIC14.28□□□□□ -0.12
SSR4P51571 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSR4P51571 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.28□□□□□ -0.12
SSR4P51571 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SSR4P51571 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.28□□□□□ -0.12
SSR4P51571 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.28□□□□□ -0.12
SSR4P51571 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SSR4P51571 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSR4P51571 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.28□□□□□ -0.12
SSR4P51571 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSR4P51571 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.28□□□□□ -0.12
SSR4P51571 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSR4P51571 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSR4P51571 CICP13-201ENST00000422015 2789 ntBASIC14.28□□□□□ -0.12
SSR4P51571 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
SSR4P51571 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SSR4P51571 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SSR4P51571 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SSR4P51571 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSR4P51571 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.27□□□□□ -0.12
SSR4P51571 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.27□□□□□ -0.12
SSR4P51571 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.27□□□□□ -0.12
SSR4P51571 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSR4P51571 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
SSR4P51571 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
SSR4P51571 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.27□□□□□ -0.12
SSR4P51571 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SSR4P51571 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SSR4P51571 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SSR4P51571 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSR4P51571 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SSR4P51571 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSR4P51571 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.27□□□□□ -0.12
SSR4P51571 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SSR4P51571 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SSR4P51571 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSR4P51571 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SSR4P51571 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.27□□□□□ -0.13
SSR4P51571 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.27□□□□□ -0.13
SSR4P51571 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSR4P51571 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SSR4P51571 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.27□□□□□ -0.13
SSR4P51571 AC234783.1-201ENST00000441761 496 ntBASIC14.27□□□□□ -0.13
SSR4P51571 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSR4P51571 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.27□□□□□ -0.13
SSR4P51571 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SSR4P51571 AP001582.1-201ENST00000525856 295 ntBASIC14.27□□□□□ -0.13
SSR4P51571 AC068587.3-201ENST00000526613 355 ntBASIC14.27□□□□□ -0.13
SSR4P51571 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.27□□□□□ -0.13
SSR4P51571 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.27□□□□□ -0.13
SSR4P51571 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.27□□□□□ -0.13
SSR4P51571 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.27□□□□□ -0.13
SSR4P51571 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSR4P51571 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.27□□□□□ -0.13
SSR4P51571 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.27□□□□□ -0.13
SSR4P51571 BTNL10-201ENST00000595971 695 ntBASIC14.27□□□□□ -0.13
SSR4P51571 AC233724.13-201ENST00000598383 410 ntBASIC14.27□□□□□ -0.13
SSR4P51571 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.27□□□□□ -0.13
SSR4P51571 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSR4P51571 RPSAP52-203ENST00000622976 1023 ntBASIC14.27□□□□□ -0.13
SSR4P51571 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SSR4P51571 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSR4P51571 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSR4P51571 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
SSR4P51571 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.27□□□□□ -0.13
SSR4P51571 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSR4P51571 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.27□□□□□ -0.13
SSR4P51571 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSR4P51571 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSR4P51571 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSR4P51571 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
SSR4P51571 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SSR4P51571 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSR4P51571 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SSR4P51571 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
SSR4P51571 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SSR4P51571 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSR4P51571 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.27□□□□□ -0.13
SSR4P51571 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.27□□□□□ -0.13
SSR4P51571 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SSR4P51571 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SSR4P51571 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.27□□□□□ -0.13
SSR4P51571 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SSR4P51571 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.26□□□□□ -0.13
SSR4P51571 AC084364.1-201ENST00000551967 1556 ntBASIC14.26□□□□□ -0.13
SSR4P51571 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSR4P51571 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SSR4P51571 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSR4P51571 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SSR4P51571 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSR4P51571 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSR4P51571 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSR4P51571 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSR4P51571 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSR4P51571 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SSR4P51571 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.26□□□□□ -0.13
SSR4P51571 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms