Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 SPTLC1P1-201ENST00000447199 261 ntBASIC15.81■□□□□ 0.12
HLA-DQB2P05538 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HLA-DQB2P05538 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 RARRES2P5-201ENST00000564013 466 ntBASIC15.8■□□□□ 0.12
HLA-DQB2P05538 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 AC009118.2-201ENST00000613275 655 ntBASIC15.8■□□□□ 0.12
HLA-DQB2P05538 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 TSPY26P-202ENST00000565928 3884 ntBASIC15.8■□□□□ 0.12
HLA-DQB2P05538 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HLA-DQB2P05538 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.79■□□□□ 0.12
HLA-DQB2P05538 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms