Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ZBED1O96006 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ZBED1O96006 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ZBED1O96006 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.53■□□□□ 0.24
ZBED1O96006 AL353779.1-201ENST00000434793 351 ntBASIC16.53■□□□□ 0.24
ZBED1O96006 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.53■□□□□ 0.24
ZBED1O96006 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.53■□□□□ 0.24
ZBED1O96006 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.53■□□□□ 0.24
ZBED1O96006 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
ZBED1O96006 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZBED1O96006 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZBED1O96006 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.53■□□□□ 0.24
ZBED1O96006 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZBED1O96006 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZBED1O96006 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ZBED1O96006 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZBED1O96006 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ZBED1O96006 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
ZBED1O96006 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZBED1O96006 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ZBED1O96006 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ZBED1O96006 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
ZBED1O96006 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZBED1O96006 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZBED1O96006 SLC7A15P-201ENST00000424028 1363 ntBASIC16.52■□□□□ 0.24
ZBED1O96006 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.52■□□□□ 0.24
ZBED1O96006 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZBED1O96006 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.52■□□□□ 0.24
ZBED1O96006 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZBED1O96006 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZBED1O96006 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZBED1O96006 CICP13-201ENST00000422015 2789 ntBASIC16.52■□□□□ 0.24
ZBED1O96006 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.52■□□□□ 0.24
ZBED1O96006 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZBED1O96006 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZBED1O96006 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZBED1O96006 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZBED1O96006 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.52■□□□□ 0.24
ZBED1O96006 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.52■□□□□ 0.24
ZBED1O96006 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZBED1O96006 AC126755.1-201ENST00000525846 6405 ntBASIC16.52■□□□□ 0.24
ZBED1O96006 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZBED1O96006 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZBED1O96006 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
ZBED1O96006 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZBED1O96006 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZBED1O96006 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.52■□□□□ 0.24
ZBED1O96006 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.52■□□□□ 0.24
ZBED1O96006 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.52■□□□□ 0.24
ZBED1O96006 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.52■□□□□ 0.24
ZBED1O96006 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.52■□□□□ 0.24
ZBED1O96006 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.52■□□□□ 0.24
ZBED1O96006 AC190387.1-201ENST00000551683 408 ntBASIC16.52■□□□□ 0.24
ZBED1O96006 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.52■□□□□ 0.24
ZBED1O96006 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.52■□□□□ 0.24
ZBED1O96006 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.52■□□□□ 0.24
ZBED1O96006 LINC02084-201ENST00000606069 1096 ntBASIC16.52■□□□□ 0.24
ZBED1O96006 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ZBED1O96006 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ZBED1O96006 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.52■□□□□ 0.24
ZBED1O96006 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
ZBED1O96006 AL136379.1-201ENST00000623471 2642 ntBASIC16.52■□□□□ 0.23
ZBED1O96006 AC138969.3-201ENST00000546612 1459 ntBASIC16.52■□□□□ 0.23
ZBED1O96006 AC138932.2-201ENST00000548268 1459 ntBASIC16.52■□□□□ 0.23
ZBED1O96006 AC126755.4-201ENST00000549796 1459 ntBASIC16.52■□□□□ 0.23
ZBED1O96006 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.52■□□□□ 0.23
ZBED1O96006 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.52■□□□□ 0.23
ZBED1O96006 AC104640.1-201ENST00000562617 2109 ntBASIC16.52■□□□□ 0.23
ZBED1O96006 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZBED1O96006 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZBED1O96006 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
ZBED1O96006 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZBED1O96006 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.52■□□□□ 0.23
ZBED1O96006 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.52■□□□□ 0.23
ZBED1O96006 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.52■□□□□ 0.23
ZBED1O96006 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZBED1O96006 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
ZBED1O96006 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZBED1O96006 AL391825.1-201ENST00000457671 1364 ntBASIC16.51■□□□□ 0.23
ZBED1O96006 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZBED1O96006 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZBED1O96006 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZBED1O96006 AC073347.1-201ENST00000421633 2643 ntBASIC16.51■□□□□ 0.23
ZBED1O96006 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.51■□□□□ 0.23
ZBED1O96006 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZBED1O96006 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.51■□□□□ 0.23
ZBED1O96006 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.51■□□□□ 0.23
ZBED1O96006 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ZBED1O96006 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZBED1O96006 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZBED1O96006 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZBED1O96006 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZBED1O96006 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZBED1O96006 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ZBED1O96006 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZBED1O96006 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ZBED1O96006 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
ZBED1O96006 CRB3P1-201ENST00000449338 276 ntBASIC16.51■□□□□ 0.23
ZBED1O96006 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.51■□□□□ 0.23
ZBED1O96006 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms