Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.14□□□□□ -0.31
SIX6O95475 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SIX6O95475 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SIX6O95475 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SIX6O95475 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.14□□□□□ -0.31
SIX6O95475 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SIX6O95475 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.14□□□□□ -0.31
SIX6O95475 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.14□□□□□ -0.31
SIX6O95475 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.14□□□□□ -0.31
SIX6O95475 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
SIX6O95475 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
SIX6O95475 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SIX6O95475 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SIX6O95475 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
SIX6O95475 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SIX6O95475 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.13□□□□□ -0.31
SIX6O95475 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.13□□□□□ -0.31
SIX6O95475 AC113367.3-201ENST00000508316 1912 ntBASIC13.13□□□□□ -0.31
SIX6O95475 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.13□□□□□ -0.31
SIX6O95475 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.13□□□□□ -0.31
SIX6O95475 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SIX6O95475 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
SIX6O95475 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.13□□□□□ -0.31
SIX6O95475 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.13□□□□□ -0.31
SIX6O95475 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.13□□□□□ -0.31
SIX6O95475 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.13□□□□□ -0.31
SIX6O95475 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.13□□□□□ -0.31
SIX6O95475 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SIX6O95475 AC233702.3-201ENST00000578656 1387 ntBASIC13.13□□□□□ -0.31
SIX6O95475 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
SIX6O95475 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
SIX6O95475 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.13□□□□□ -0.31
SIX6O95475 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC13.13□□□□□ -0.31
SIX6O95475 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SIX6O95475 NTF6B-201ENST00000591913 560 ntBASIC13.13□□□□□ -0.31
SIX6O95475 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
SIX6O95475 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.13□□□□□ -0.31
SIX6O95475 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
SIX6O95475 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.13□□□□□ -0.31
SIX6O95475 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SIX6O95475 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
SIX6O95475 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.13□□□□□ -0.31
SIX6O95475 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.13□□□□□ -0.31
SIX6O95475 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SIX6O95475 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
SIX6O95475 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.12□□□□□ -0.31
SIX6O95475 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
SIX6O95475 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
SIX6O95475 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
SIX6O95475 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.12□□□□□ -0.31
SIX6O95475 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.12□□□□□ -0.31
SIX6O95475 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms