Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 CLK3P2-201ENST00000427566 1453 ntBASIC14.69□□□□□ -0.06
LDB3O75112 AC007541.1-201ENST00000570282 1469 ntBASIC14.69□□□□□ -0.06
LDB3O75112 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LDB3O75112 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LDB3O75112 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LDB3O75112 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LDB3O75112 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.69□□□□□ -0.06
LDB3O75112 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LDB3O75112 AC067930.6-201ENST00000623257 4947 ntBASIC14.69□□□□□ -0.06
LDB3O75112 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LDB3O75112 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.69□□□□□ -0.06
LDB3O75112 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.69□□□□□ -0.06
LDB3O75112 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.69□□□□□ -0.06
LDB3O75112 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LDB3O75112 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LDB3O75112 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
LDB3O75112 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
LDB3O75112 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LDB3O75112 AL133267.1-201ENST00000398220 340 ntBASIC14.69□□□□□ -0.06
LDB3O75112 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.69□□□□□ -0.06
LDB3O75112 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.69□□□□□ -0.06
LDB3O75112 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.69□□□□□ -0.06
LDB3O75112 KRT18P43-201ENST00000469825 1281 ntBASIC14.69□□□□□ -0.06
LDB3O75112 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LDB3O75112 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.69□□□□□ -0.06
LDB3O75112 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.69□□□□□ -0.06
LDB3O75112 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.69□□□□□ -0.06
LDB3O75112 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.69□□□□□ -0.06
LDB3O75112 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.69□□□□□ -0.06
LDB3O75112 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.69□□□□□ -0.06
LDB3O75112 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.69□□□□□ -0.06
LDB3O75112 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
LDB3O75112 AC015910.1-201ENST00000579400 975 ntBASIC14.69□□□□□ -0.06
LDB3O75112 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
LDB3O75112 AL132655.2-201ENST00000596276 594 ntBASIC14.69□□□□□ -0.06
LDB3O75112 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LDB3O75112 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LDB3O75112 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LDB3O75112 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LDB3O75112 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LDB3O75112 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LDB3O75112 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LDB3O75112 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LDB3O75112 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LDB3O75112 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
LDB3O75112 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.69□□□□□ -0.06
LDB3O75112 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
LDB3O75112 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
LDB3O75112 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.69□□□□□ -0.06
LDB3O75112 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LDB3O75112 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LDB3O75112 LINC00554-201ENST00000564841 3011 ntBASIC14.68□□□□□ -0.06
LDB3O75112 AC063926.3-201ENST00000624734 5658 ntBASIC14.68□□□□□ -0.06
LDB3O75112 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LDB3O75112 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
LDB3O75112 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.68□□□□□ -0.06
LDB3O75112 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.68□□□□□ -0.06
LDB3O75112 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LDB3O75112 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
LDB3O75112 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.68□□□□□ -0.06
LDB3O75112 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.68□□□□□ -0.06
LDB3O75112 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.68□□□□□ -0.06
LDB3O75112 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.68□□□□□ -0.06
LDB3O75112 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.68□□□□□ -0.06
LDB3O75112 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
LDB3O75112 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
LDB3O75112 TERF1P3-201ENST00000505638 1227 ntBASIC14.68□□□□□ -0.06
LDB3O75112 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.68□□□□□ -0.06
LDB3O75112 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.68□□□□□ -0.06
LDB3O75112 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.68□□□□□ -0.06
LDB3O75112 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.68□□□□□ -0.06
LDB3O75112 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.68□□□□□ -0.06
LDB3O75112 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.68□□□□□ -0.06
LDB3O75112 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.68□□□□□ -0.06
LDB3O75112 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.68□□□□□ -0.06
LDB3O75112 TMBIM7P-203ENST00000641617 1718 ntBASIC14.68□□□□□ -0.06
LDB3O75112 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
LDB3O75112 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LDB3O75112 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LDB3O75112 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LDB3O75112 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.68□□□□□ -0.06
LDB3O75112 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.68□□□□□ -0.06
LDB3O75112 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LDB3O75112 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.68□□□□□ -0.06
LDB3O75112 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.68□□□□□ -0.06
LDB3O75112 AC084364.1-201ENST00000551967 1556 ntBASIC14.68□□□□□ -0.06
LDB3O75112 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LDB3O75112 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LDB3O75112 AC013268.4-201ENST00000637413 2228 ntBASIC14.68□□□□□ -0.06
LDB3O75112 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.68□□□□□ -0.06
LDB3O75112 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LDB3O75112 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.67□□□□□ -0.06
LDB3O75112 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.67□□□□□ -0.06
LDB3O75112 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.67□□□□□ -0.06
LDB3O75112 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.67□□□□□ -0.06
LDB3O75112 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.67□□□□□ -0.06
LDB3O75112 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LDB3O75112 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms