Protein–RNA interactions for Protein: B4DXG7

cDNA FLJ57652, highly similar to Ephrin-A3, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B4DXG7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
B4DXG7 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.55□□□□□ -0.08
B4DXG7 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
B4DXG7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
B4DXG7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.54□□□□□ -0.08
B4DXG7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.54□□□□□ -0.08
B4DXG7 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
B4DXG7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.54□□□□□ -0.08
B4DXG7 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
B4DXG7 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
B4DXG7 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.54□□□□□ -0.08
B4DXG7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
B4DXG7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
B4DXG7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
B4DXG7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
B4DXG7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
B4DXG7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.54□□□□□ -0.08
B4DXG7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
B4DXG7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.54□□□□□ -0.08
B4DXG7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.54□□□□□ -0.08
B4DXG7 AC074338.1-201ENST00000416825 156 ntBASIC14.54□□□□□ -0.08
B4DXG7 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.54□□□□□ -0.08
B4DXG7 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.54□□□□□ -0.08
B4DXG7 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.54□□□□□ -0.08
B4DXG7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
B4DXG7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.54□□□□□ -0.08
B4DXG7 SPDYE18-201ENST00000510091 1050 ntBASIC14.54□□□□□ -0.08
B4DXG7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.54□□□□□ -0.08
B4DXG7 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.54□□□□□ -0.08
B4DXG7 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
B4DXG7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.54□□□□□ -0.08
B4DXG7 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.54□□□□□ -0.08
B4DXG7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC14.54□□□□□ -0.08
B4DXG7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
B4DXG7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
B4DXG7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.54□□□□□ -0.08
B4DXG7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
B4DXG7 AC004840.1-201ENST00000636359 365 ntBASIC14.54□□□□□ -0.08
B4DXG7 AL033527.5-202ENST00000641632 1098 ntBASIC14.54□□□□□ -0.08
B4DXG7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
B4DXG7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
B4DXG7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.54□□□□□ -0.08
B4DXG7 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
B4DXG7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
B4DXG7 AC011477.6-201ENST00000604980 1927 ntBASIC14.54□□□□□ -0.08
B4DXG7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
B4DXG7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
B4DXG7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.54□□□□□ -0.08
B4DXG7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
B4DXG7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
B4DXG7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.54□□□□□ -0.08
B4DXG7 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.54□□□□□ -0.08
B4DXG7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
B4DXG7 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
B4DXG7 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
B4DXG7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
B4DXG7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
B4DXG7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.54□□□□□ -0.08
B4DXG7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.54□□□□□ -0.08
B4DXG7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
B4DXG7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
B4DXG7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
B4DXG7 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
B4DXG7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.53□□□□□ -0.08
B4DXG7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
B4DXG7 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
B4DXG7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
B4DXG7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.53□□□□□ -0.08
B4DXG7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.53□□□□□ -0.08
B4DXG7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
B4DXG7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
B4DXG7 GRK6P1-201ENST00000400595 1711 ntBASIC14.53□□□□□ -0.08
B4DXG7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
B4DXG7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.53□□□□□ -0.08
B4DXG7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
B4DXG7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
B4DXG7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
B4DXG7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.53□□□□□ -0.08
B4DXG7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
B4DXG7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
B4DXG7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
B4DXG7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
B4DXG7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
B4DXG7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.53□□□□□ -0.08
B4DXG7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
B4DXG7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
B4DXG7 HNRNPUP1-201ENST00000554987 333 ntBASIC14.53□□□□□ -0.08
B4DXG7 AC044860.1-202ENST00000559481 777 ntBASIC14.53□□□□□ -0.08
B4DXG7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.53□□□□□ -0.08
B4DXG7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.53□□□□□ -0.08
B4DXG7 AC097359.3-201ENST00000603982 1210 ntBASIC14.53□□□□□ -0.08
B4DXG7 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.53□□□□□ -0.08
B4DXG7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
B4DXG7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.53□□□□□ -0.08
B4DXG7 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
B4DXG7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
B4DXG7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
B4DXG7 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
B4DXG7 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
B4DXG7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms