Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC11□□□□□ -0.65
LINC01546A6NGU7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
LINC01546A6NGU7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 SCARNA2-201ENST00000458748 420 ntBASIC11□□□□□ -0.65
LINC01546A6NGU7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC11□□□□□ -0.65
LINC01546A6NGU7 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 RPL28-209ENST00000560055 670 ntTSL 3 BASIC11□□□□□ -0.65
LINC01546A6NGU7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC11□□□□□ -0.65
LINC01546A6NGU7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11□□□□□ -0.65
LINC01546A6NGU7 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11□□□□□ -0.65
LINC01546A6NGU7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC11□□□□□ -0.65
LINC01546A6NGU7 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC11□□□□□ -0.65
LINC01546A6NGU7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC11□□□□□ -0.65
LINC01546A6NGU7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
LINC01546A6NGU7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC11□□□□□ -0.65
LINC01546A6NGU7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 AC073548.1-201ENST00000624088 1882 ntBASIC11□□□□□ -0.65
LINC01546A6NGU7 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC11□□□□□ -0.65
LINC01546A6NGU7 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
LINC01546A6NGU7 COL6A4P2-202ENST00000504443 2753 ntBASIC10.99□□□□□ -0.65
LINC01546A6NGU7 REXO1L4P-201ENST00000605109 1937 ntBASIC10.99□□□□□ -0.65
LINC01546A6NGU7 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 NUTM2HP-201ENST00000442076 2498 ntBASIC10.99□□□□□ -0.65
LINC01546A6NGU7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 SYS1-203ENST00000414310 795 ntTSL 3 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 AL513480.1-201ENST00000451731 511 ntBASIC10.99□□□□□ -0.65
LINC01546A6NGU7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 AC022447.6-201ENST00000515522 438 ntBASIC10.99□□□□□ -0.65
LINC01546A6NGU7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 AC073389.1-201ENST00000595595 795 ntBASIC10.99□□□□□ -0.65
LINC01546A6NGU7 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
LINC01546A6NGU7 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms