Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 AC091304.2-201ENST00000564639 760 ntBASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 MIR4751-201ENST00000578027 74 ntBASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 MIR3652-201ENST00000579335 131 ntBASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 REXO1L1P-202ENST00000608646 1974 ntBASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 ZBED1P1-201ENST00000502364 1930 ntBASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
MEIS3P1A6NDR6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 BNIP3P1-202ENST00000550043 1585 ntBASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 SAPCD2P3-201ENST00000455031 850 ntBASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
MEIS3P1A6NDR6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MEIS3P1A6NDR6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MEIS3P1A6NDR6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.46□□□□□ -0.26
MEIS3P1A6NDR6 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.46□□□□□ -0.26
MEIS3P1A6NDR6 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.46□□□□□ -0.26
MEIS3P1A6NDR6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.46□□□□□ -0.26
MEIS3P1A6NDR6 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MEIS3P1A6NDR6 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.46□□□□□ -0.26
MEIS3P1A6NDR6 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
MEIS3P1A6NDR6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MEIS3P1A6NDR6 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.45□□□□□ -0.26
MEIS3P1A6NDR6 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MEIS3P1A6NDR6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
MEIS3P1A6NDR6 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
MEIS3P1A6NDR6 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MEIS3P1A6NDR6 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.45□□□□□ -0.26
MEIS3P1A6NDR6 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MEIS3P1A6NDR6 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MEIS3P1A6NDR6 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.45□□□□□ -0.26
MEIS3P1A6NDR6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
MEIS3P1A6NDR6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
MEIS3P1A6NDR6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.45□□□□□ -0.26
MEIS3P1A6NDR6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.45□□□□□ -0.26
MEIS3P1A6NDR6 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MEIS3P1A6NDR6 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
MEIS3P1A6NDR6 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.45□□□□□ -0.26
MEIS3P1A6NDR6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.45□□□□□ -0.26
MEIS3P1A6NDR6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 215.5 ms