Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HMG20AQ9NP66 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 PAWRP1-201ENST00000451083 565 ntBASIC14.31□□□□□ -0.12
HMG20AQ9NP66 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 IRF8-202ENST00000562492 946 ntTSL 3 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 CR383656.2-201ENST00000548656 2254 ntBASIC14.31□□□□□ -0.12
HMG20AQ9NP66 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.31□□□□□ -0.12
HMG20AQ9NP66 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 INTS4P1-203ENST00000641008 3683 ntBASIC14.3□□□□□ -0.12
HMG20AQ9NP66 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 AC027612.1-201ENST00000445234 2395 ntBASIC14.3□□□□□ -0.12
HMG20AQ9NP66 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 AC092135.3-201ENST00000624151 1846 ntBASIC14.3□□□□□ -0.12
HMG20AQ9NP66 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 AKR1C7P-201ENST00000305623 895 ntBASIC14.3□□□□□ -0.12
HMG20AQ9NP66 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.3□□□□□ -0.12
HMG20AQ9NP66 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms