Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MRM3Q9HC36 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MRM3Q9HC36 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
MRM3Q9HC36 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
MRM3Q9HC36 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.64■□□□□ 0.09
MRM3Q9HC36 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.64■□□□□ 0.09
MRM3Q9HC36 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
MRM3Q9HC36 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
MRM3Q9HC36 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.63■□□□□ 0.09
MRM3Q9HC36 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
MRM3Q9HC36 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MRM3Q9HC36 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.63■□□□□ 0.09
MRM3Q9HC36 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
MRM3Q9HC36 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
MRM3Q9HC36 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MRM3Q9HC36 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MRM3Q9HC36 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
MRM3Q9HC36 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.63■□□□□ 0.09
MRM3Q9HC36 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MRM3Q9HC36 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MRM3Q9HC36 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
MRM3Q9HC36 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.63■□□□□ 0.09
MRM3Q9HC36 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
MRM3Q9HC36 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MRM3Q9HC36 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.63■□□□□ 0.09
MRM3Q9HC36 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.63■□□□□ 0.09
MRM3Q9HC36 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.63■□□□□ 0.09
MRM3Q9HC36 AC027369.6-201ENST00000525520 931 ntBASIC15.63■□□□□ 0.09
MRM3Q9HC36 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.63■□□□□ 0.09
MRM3Q9HC36 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.63■□□□□ 0.09
MRM3Q9HC36 AL844908.2-201ENST00000609461 460 ntBASIC15.63■□□□□ 0.09
MRM3Q9HC36 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.63■□□□□ 0.09
MRM3Q9HC36 AL109936.8-201ENST00000641772 604 ntBASIC15.63■□□□□ 0.09
MRM3Q9HC36 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.63■□□□□ 0.09
MRM3Q9HC36 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MRM3Q9HC36 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
MRM3Q9HC36 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.63■□□□□ 0.09
MRM3Q9HC36 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MRM3Q9HC36 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
MRM3Q9HC36 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
MRM3Q9HC36 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
MRM3Q9HC36 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.63■□□□□ 0.09
MRM3Q9HC36 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
MRM3Q9HC36 AL121723.1-201ENST00000445194 1519 ntBASIC15.63■□□□□ 0.09
MRM3Q9HC36 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.63■□□□□ 0.09
MRM3Q9HC36 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRM3Q9HC36 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRM3Q9HC36 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MRM3Q9HC36 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRM3Q9HC36 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRM3Q9HC36 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.62■□□□□ 0.09
MRM3Q9HC36 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.62■□□□□ 0.09
MRM3Q9HC36 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.62■□□□□ 0.09
MRM3Q9HC36 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.62■□□□□ 0.09
MRM3Q9HC36 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MRM3Q9HC36 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.62■□□□□ 0.09
MRM3Q9HC36 AC104457.1-201ENST00000401024 814 ntBASIC15.62■□□□□ 0.09
MRM3Q9HC36 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MRM3Q9HC36 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.62■□□□□ 0.09
MRM3Q9HC36 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
MRM3Q9HC36 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.62■□□□□ 0.09
MRM3Q9HC36 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.62■□□□□ 0.09
MRM3Q9HC36 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRM3Q9HC36 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
MRM3Q9HC36 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRM3Q9HC36 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MRM3Q9HC36 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
MRM3Q9HC36 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRM3Q9HC36 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRM3Q9HC36 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MRM3Q9HC36 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRM3Q9HC36 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
MRM3Q9HC36 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
MRM3Q9HC36 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
MRM3Q9HC36 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.62■□□□□ 0.09
MRM3Q9HC36 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.62■□□□□ 0.09
MRM3Q9HC36 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
MRM3Q9HC36 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
MRM3Q9HC36 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
MRM3Q9HC36 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
MRM3Q9HC36 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.62■□□□□ 0.09
MRM3Q9HC36 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
MRM3Q9HC36 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
MRM3Q9HC36 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
MRM3Q9HC36 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
MRM3Q9HC36 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MRM3Q9HC36 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.61■□□□□ 0.09
MRM3Q9HC36 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MRM3Q9HC36 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MRM3Q9HC36 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.61■□□□□ 0.09
MRM3Q9HC36 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MRM3Q9HC36 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
MRM3Q9HC36 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
MRM3Q9HC36 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MRM3Q9HC36 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.61■□□□□ 0.09
MRM3Q9HC36 MIR770-201ENST00000390219 98 ntBASIC15.61■□□□□ 0.09
MRM3Q9HC36 AC097493.3-201ENST00000509725 367 ntBASIC15.61■□□□□ 0.09
MRM3Q9HC36 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.61■□□□□ 0.09
MRM3Q9HC36 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.61■□□□□ 0.09
MRM3Q9HC36 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms