Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 AC013726.1-201ENST00000563747 2285 ntBASIC14.52□□□□□ -0.09
POLR2J3Q9H1A7 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 AC004832.2-201ENST00000426397 482 ntBASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 HNRNPUP1-201ENST00000554987 333 ntBASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 AC097359.3-201ENST00000603982 1210 ntBASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 AC007686.3-201ENST00000619017 3487 ntBASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 AP3S2-216ENST00000617003 1561 ntBASIC14.51□□□□□ -0.09
POLR2J3Q9H1A7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 AC148477.4-201ENST00000613430 1793 ntBASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 AC023274.1-201ENST00000418278 595 ntBASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 AC026396.1-201ENST00000419388 421 ntBASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 RARRES2P9-201ENST00000565168 469 ntBASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 MTDHP5-201ENST00000598980 586 ntBASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 AC023908.3-201ENST00000564211 3047 ntBASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.5□□□□□ -0.09
POLR2J3Q9H1A7 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
POLR2J3Q9H1A7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms