Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC116353.5-201ENST00000638148 1699 ntBASIC16.81■□□□□ 0.28
LRCH3Q96II8 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH3Q96II8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH3Q96II8 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH3Q96II8 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH3Q96II8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH3Q96II8 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH3Q96II8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH3Q96II8 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH3Q96II8 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 AL139008.1-201ENST00000437894 228 ntBASIC16.81■□□□□ 0.28
LRCH3Q96II8 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 AC116345.2-201ENST00000512837 523 ntBASIC16.81■□□□□ 0.28
LRCH3Q96II8 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 DNM1P51-201ENST00000558149 522 ntBASIC16.81■□□□□ 0.28
LRCH3Q96II8 AC103988.2-201ENST00000561804 725 ntBASIC16.81■□□□□ 0.28
LRCH3Q96II8 AL022344.2-201ENST00000568976 968 ntBASIC16.81■□□□□ 0.28
LRCH3Q96II8 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 RN7SL596P-201ENST00000582123 288 ntBASIC16.81■□□□□ 0.28
LRCH3Q96II8 MIR4321-201ENST00000592276 80 ntBASIC16.81■□□□□ 0.28
LRCH3Q96II8 AC107373.2-201ENST00000607735 490 ntBASIC16.81■□□□□ 0.28
LRCH3Q96II8 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH3Q96II8 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH3Q96II8 AC079328.2-201ENST00000561241 3354 ntBASIC16.81■□□□□ 0.28
LRCH3Q96II8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH3Q96II8 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH3Q96II8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH3Q96II8 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH3Q96II8 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH3Q96II8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH3Q96II8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRCH3Q96II8 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.81■□□□□ 0.28
LRCH3Q96II8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH3Q96II8 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH3Q96II8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH3Q96II8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH3Q96II8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH3Q96II8 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH3Q96II8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH3Q96II8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 TUBB8P12-201ENST00000308911 1335 ntBASIC16.8■□□□□ 0.28
LRCH3Q96II8 TUBB7P-202ENST00000428444 1305 ntBASIC16.8■□□□□ 0.28
LRCH3Q96II8 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 TUBB8P7-204ENST00000567960 1332 ntBASIC16.8■□□□□ 0.28
LRCH3Q96II8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH3Q96II8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH3Q96II8 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH3Q96II8 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH3Q96II8 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH3Q96II8 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 PIN4P1-201ENST00000451079 396 ntBASIC16.8■□□□□ 0.28
LRCH3Q96II8 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH3Q96II8 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH3Q96II8 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRCH3Q96II8 AC046158.3-201ENST00000624947 2558 ntBASIC16.8■□□□□ 0.28
LRCH3Q96II8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.8■□□□□ 0.28
LRCH3Q96II8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.79■□□□□ 0.28
LRCH3Q96II8 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LRCH3Q96II8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRCH3Q96II8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.79■□□□□ 0.28
LRCH3Q96II8 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms