Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 AC022144.1-201ENST00000602255 1580 ntBASIC13.71□□□□□ -0.21
CPEB3Q8NE35 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 AC008738.7-201ENST00000609744 511 ntBASIC13.71□□□□□ -0.21
CPEB3Q8NE35 AC004461.2-201ENST00000629517 803 ntBASIC13.71□□□□□ -0.21
CPEB3Q8NE35 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.71□□□□□ -0.21
CPEB3Q8NE35 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CPEB3Q8NE35 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CPEB3Q8NE35 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CPEB3Q8NE35 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CPEB3Q8NE35 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
CPEB3Q8NE35 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CPEB3Q8NE35 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CPEB3Q8NE35 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.71□□□□□ -0.22
CPEB3Q8NE35 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CPEB3Q8NE35 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CPEB3Q8NE35 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CPEB3Q8NE35 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.71□□□□□ -0.22
CPEB3Q8NE35 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CPEB3Q8NE35 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CPEB3Q8NE35 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 MRPS18AP1-201ENST00000414458 589 ntBASIC13.7□□□□□ -0.22
CPEB3Q8NE35 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CPEB3Q8NE35 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms