Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 AL645728.2-202ENST00000641679 227 ntBASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 AC009090.5-201ENST00000624886 2285 ntBASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC27A1Q6PCB7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 AC093525.8-201ENST00000624099 1342 ntBASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 NUS1P3-201ENST00000423502 862 ntBASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 GNRHR2-203ENST00000581100 1187 ntBASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 AC105250.1-201ENST00000509378 2057 ntBASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC27A1Q6PCB7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 RPL7P3-201ENST00000441388 714 ntBASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 AC004066.1-201ENST00000502488 802 ntBASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 AP000812.2-201ENST00000538934 718 ntBASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 AL139384.1-201ENST00000612143 3047 ntBASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC27A1Q6PCB7 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC27A1Q6PCB7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms