Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 AL136982.4-201ENST00000437689 1740 ntBASIC14.29□□□□□ -0.12
NIPAL3Q6P499 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 REXO1L1P-202ENST00000608646 1974 ntBASIC14.29□□□□□ -0.12
NIPAL3Q6P499 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 AGAP7P-201ENST00000582299 2062 ntBASIC14.29□□□□□ -0.12
NIPAL3Q6P499 AGAP14-201ENST00000624701 2060 ntBASIC14.29□□□□□ -0.12
NIPAL3Q6P499 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 AL009178.2-201ENST00000597278 2719 ntBASIC14.28□□□□□ -0.12
NIPAL3Q6P499 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 CICP23-201ENST00000605013 2741 ntBASIC14.28□□□□□ -0.12
NIPAL3Q6P499 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
NIPAL3Q6P499 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.27□□□□□ -0.12
NIPAL3Q6P499 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NIPAL3Q6P499 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NIPAL3Q6P499 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NIPAL3Q6P499 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.27□□□□□ -0.12
NIPAL3Q6P499 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NIPAL3Q6P499 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.27□□□□□ -0.12
NIPAL3Q6P499 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
NIPAL3Q6P499 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NIPAL3Q6P499 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NIPAL3Q6P499 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NIPAL3Q6P499 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NIPAL3Q6P499 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
NIPAL3Q6P499 CYP4F24P-201ENST00000586049 1580 ntBASIC14.27□□□□□ -0.12
NIPAL3Q6P499 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NIPAL3Q6P499 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NIPAL3Q6P499 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
NIPAL3Q6P499 AL035456.1-201ENST00000456064 1369 ntBASIC14.27□□□□□ -0.12
NIPAL3Q6P499 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.27□□□□□ -0.12
NIPAL3Q6P499 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.27□□□□□ -0.13
NIPAL3Q6P499 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms