Protein–RNA interactions for Protein: Q587J8

KHDC3L, KHDC3-like protein, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC3LQ587J8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 AC006557.2-201ENST00000592985 1240 ntBASIC12.54□□□□□ -0.4
KHDC3LQ587J8 MTDHP4-201ENST00000600287 670 ntBASIC12.54□□□□□ -0.4
KHDC3LQ587J8 AC138894.3-201ENST00000603787 634 ntBASIC12.54□□□□□ -0.4
KHDC3LQ587J8 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 AC023024.2-201ENST00000623561 1993 ntBASIC12.54□□□□□ -0.4
KHDC3LQ587J8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
KHDC3LQ587J8 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 RN7SL850P-201ENST00000579959 291 ntBASIC12.53□□□□□ -0.4
KHDC3LQ587J8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.53□□□□□ -0.4
KHDC3LQ587J8 AC069148.1-201ENST00000608741 768 ntBASIC12.53□□□□□ -0.4
KHDC3LQ587J8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 IER3-202ENST00000376377 1350 ntBASIC12.53□□□□□ -0.4
KHDC3LQ587J8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 AC092135.3-201ENST00000624151 1846 ntBASIC12.53□□□□□ -0.4
KHDC3LQ587J8 WASH6P-202ENST00000359512 1437 ntBASIC12.53□□□□□ -0.4
KHDC3LQ587J8 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 AP001282.1-201ENST00000531301 1499 ntBASIC12.53□□□□□ -0.4
KHDC3LQ587J8 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
KHDC3LQ587J8 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
KHDC3LQ587J8 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.52□□□□□ -0.4
KHDC3LQ587J8 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms