Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CDR2Q01850 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CDR2Q01850 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDR2Q01850 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDR2Q01850 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDR2Q01850 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDR2Q01850 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.69■□□□□ 0.26
CDR2Q01850 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.69■□□□□ 0.26
CDR2Q01850 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.69■□□□□ 0.26
CDR2Q01850 KRT18P64-201ENST00000434946 1219 ntBASIC16.69■□□□□ 0.26
CDR2Q01850 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.69■□□□□ 0.26
CDR2Q01850 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.69■□□□□ 0.26
CDR2Q01850 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.69■□□□□ 0.26
CDR2Q01850 AC069120.2-201ENST00000524091 540 ntBASIC16.69■□□□□ 0.26
CDR2Q01850 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.69■□□□□ 0.26
CDR2Q01850 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.69■□□□□ 0.26
CDR2Q01850 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.69■□□□□ 0.26
CDR2Q01850 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.69■□□□□ 0.26
CDR2Q01850 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.69■□□□□ 0.26
CDR2Q01850 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CDR2Q01850 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.69■□□□□ 0.26
CDR2Q01850 AC010336.2-201ENST00000564226 506 ntBASIC16.69■□□□□ 0.26
CDR2Q01850 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.69■□□□□ 0.26
CDR2Q01850 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDR2Q01850 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDR2Q01850 AC099063.4-201ENST00000641099 1602 ntBASIC16.69■□□□□ 0.26
CDR2Q01850 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CDR2Q01850 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDR2Q01850 LINC02228-204ENST00000642115 2962 ntBASIC16.69■□□□□ 0.26
CDR2Q01850 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDR2Q01850 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDR2Q01850 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDR2Q01850 AC023024.2-201ENST00000623561 1993 ntBASIC16.69■□□□□ 0.26
CDR2Q01850 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDR2Q01850 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDR2Q01850 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDR2Q01850 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDR2Q01850 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDR2Q01850 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CDR2Q01850 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CDR2Q01850 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.69■□□□□ 0.26
CDR2Q01850 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CDR2Q01850 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
CDR2Q01850 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDR2Q01850 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
CDR2Q01850 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.68■□□□□ 0.26
CDR2Q01850 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDR2Q01850 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDR2Q01850 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDR2Q01850 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDR2Q01850 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDR2Q01850 AC107890.1-201ENST00000422478 521 ntBASIC16.68■□□□□ 0.26
CDR2Q01850 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.68■□□□□ 0.26
CDR2Q01850 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.68■□□□□ 0.26
CDR2Q01850 RPL13P2-201ENST00000440687 659 ntBASIC16.68■□□□□ 0.26
CDR2Q01850 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDR2Q01850 RN7SL618P-201ENST00000477850 296 ntBASIC16.68■□□□□ 0.26
CDR2Q01850 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDR2Q01850 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDR2Q01850 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.68■□□□□ 0.26
CDR2Q01850 AC140878.1-201ENST00000565277 250 ntBASIC16.68■□□□□ 0.26
CDR2Q01850 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.68■□□□□ 0.26
CDR2Q01850 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC16.68■□□□□ 0.26
CDR2Q01850 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.68■□□□□ 0.26
CDR2Q01850 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDR2Q01850 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDR2Q01850 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDR2Q01850 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.68■□□□□ 0.26
CDR2Q01850 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDR2Q01850 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDR2Q01850 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDR2Q01850 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDR2Q01850 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.68■□□□□ 0.26
CDR2Q01850 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CDR2Q01850 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDR2Q01850 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CDR2Q01850 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDR2Q01850 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDR2Q01850 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CDR2Q01850 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.68■□□□□ 0.26
CDR2Q01850 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CDR2Q01850 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.67■□□□□ 0.26
CDR2Q01850 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.67■□□□□ 0.26
CDR2Q01850 TCAF2P1-201ENST00000291129 2421 ntBASIC16.67■□□□□ 0.26
CDR2Q01850 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.67■□□□□ 0.26
CDR2Q01850 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CDR2Q01850 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.67■□□□□ 0.26
CDR2Q01850 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CDR2Q01850 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms