Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.49□□□□□ -0.25
AP3S2P59780 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.49□□□□□ -0.25
AP3S2P59780 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.49□□□□□ -0.25
AP3S2P59780 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.49□□□□□ -0.25
AP3S2P59780 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S2P59780 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
AP3S2P59780 AC092135.3-201ENST00000624151 1846 ntBASIC13.48□□□□□ -0.25
AP3S2P59780 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.48□□□□□ -0.25
AP3S2P59780 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
AP3S2P59780 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
AP3S2P59780 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.48□□□□□ -0.25
AP3S2P59780 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.48□□□□□ -0.25
AP3S2P59780 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
AP3S2P59780 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.48□□□□□ -0.25
AP3S2P59780 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.48□□□□□ -0.25
AP3S2P59780 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.48□□□□□ -0.25
AP3S2P59780 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.48□□□□□ -0.25
AP3S2P59780 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC13.48□□□□□ -0.25
AP3S2P59780 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.48□□□□□ -0.25
AP3S2P59780 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.48□□□□□ -0.25
AP3S2P59780 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.48□□□□□ -0.25
AP3S2P59780 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC13.48□□□□□ -0.25
AP3S2P59780 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
AP3S2P59780 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.48□□□□□ -0.25
AP3S2P59780 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC13.48□□□□□ -0.25
AP3S2P59780 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
AP3S2P59780 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.48□□□□□ -0.25
AP3S2P59780 MIR4313-201ENST00000580760 101 ntBASIC13.48□□□□□ -0.25
AP3S2P59780 NKAPP1-205ENST00000585790 367 ntBASIC13.48□□□□□ -0.25
AP3S2P59780 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.48□□□□□ -0.25
AP3S2P59780 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.48□□□□□ -0.25
AP3S2P59780 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
AP3S2P59780 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.48□□□□□ -0.25
AP3S2P59780 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
AP3S2P59780 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
AP3S2P59780 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.48□□□□□ -0.25
AP3S2P59780 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
AP3S2P59780 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
AP3S2P59780 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
AP3S2P59780 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
AP3S2P59780 AC016734.2-201ENST00000624325 1377 ntBASIC13.47□□□□□ -0.25
AP3S2P59780 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.47□□□□□ -0.25
AP3S2P59780 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
AP3S2P59780 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.47□□□□□ -0.25
AP3S2P59780 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 MBLAC2-202ENST00000514906 1936 ntBASIC13.47□□□□□ -0.25
AP3S2P59780 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.47□□□□□ -0.25
AP3S2P59780 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC13.47□□□□□ -0.25
AP3S2P59780 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AP3S2P59780 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.47□□□□□ -0.25
AP3S2P59780 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms