Protein–RNA interactions for Protein: P57682

KLF3, Krueppel-like factor 3, humanhuman

Predicted RBP Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3P57682 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.47□□□□□ -0.25
KLF3P57682 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.47□□□□□ -0.25
KLF3P57682 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.47□□□□□ -0.25
KLF3P57682 AC140912.1-201ENST00000577171 1054 ntBASIC13.47□□□□□ -0.25
KLF3P57682 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.47□□□□□ -0.25
KLF3P57682 AC099568.2-201ENST00000609194 695 ntBASIC13.47□□□□□ -0.25
KLF3P57682 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.47□□□□□ -0.25
KLF3P57682 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KLF3P57682 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KLF3P57682 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
KLF3P57682 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.47□□□□□ -0.25
KLF3P57682 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KLF3P57682 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KLF3P57682 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
KLF3P57682 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KLF3P57682 AP005117.1-202ENST00000581724 1908 ntBASIC13.47□□□□□ -0.25
KLF3P57682 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
KLF3P57682 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KLF3P57682 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KLF3P57682 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.46□□□□□ -0.25
KLF3P57682 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.46□□□□□ -0.25
KLF3P57682 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
KLF3P57682 AC007326.2-201ENST00000624224 7579 ntBASIC13.46□□□□□ -0.25
KLF3P57682 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
KLF3P57682 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KLF3P57682 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
KLF3P57682 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
KLF3P57682 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
KLF3P57682 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
KLF3P57682 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KLF3P57682 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC13.46□□□□□ -0.25
KLF3P57682 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.46□□□□□ -0.25
KLF3P57682 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.46□□□□□ -0.25
KLF3P57682 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
KLF3P57682 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
KLF3P57682 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
KLF3P57682 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
KLF3P57682 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KLF3P57682 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.46□□□□□ -0.25
KLF3P57682 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
KLF3P57682 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
KLF3P57682 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KLF3P57682 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KLF3P57682 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KLF3P57682 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.46□□□□□ -0.25
KLF3P57682 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
KLF3P57682 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KLF3P57682 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.46□□□□□ -0.25
KLF3P57682 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.46□□□□□ -0.25
KLF3P57682 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.46□□□□□ -0.25
KLF3P57682 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.46□□□□□ -0.25
KLF3P57682 KRT18P64-201ENST00000434946 1219 ntBASIC13.46□□□□□ -0.25
KLF3P57682 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.46□□□□□ -0.25
KLF3P57682 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.46□□□□□ -0.25
KLF3P57682 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.46□□□□□ -0.25
KLF3P57682 KRT18P43-201ENST00000469825 1281 ntBASIC13.46□□□□□ -0.25
KLF3P57682 AC104596.2-201ENST00000512793 793 ntBASIC13.46□□□□□ -0.25
KLF3P57682 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.46□□□□□ -0.25
KLF3P57682 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
KLF3P57682 LINC02084-201ENST00000606069 1096 ntBASIC13.46□□□□□ -0.25
KLF3P57682 AC004790.1-201ENST00000612686 536 ntBASIC13.46□□□□□ -0.25
KLF3P57682 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.46□□□□□ -0.25
KLF3P57682 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KLF3P57682 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
KLF3P57682 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
KLF3P57682 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.25
KLF3P57682 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
KLF3P57682 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.46□□□□□ -0.26
KLF3P57682 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.46□□□□□ -0.26
KLF3P57682 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
KLF3P57682 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
KLF3P57682 LINC02228-204ENST00000642115 2962 ntBASIC13.46□□□□□ -0.26
KLF3P57682 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.46□□□□□ -0.26
KLF3P57682 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
KLF3P57682 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.46□□□□□ -0.26
KLF3P57682 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
KLF3P57682 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.46□□□□□ -0.26
KLF3P57682 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.45□□□□□ -0.26
KLF3P57682 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KLF3P57682 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
KLF3P57682 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
KLF3P57682 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.45□□□□□ -0.26
KLF3P57682 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KLF3P57682 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.45□□□□□ -0.26
KLF3P57682 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
KLF3P57682 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
KLF3P57682 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
KLF3P57682 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KLF3P57682 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
KLF3P57682 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
KLF3P57682 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
KLF3P57682 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.45□□□□□ -0.26
KLF3P57682 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
KLF3P57682 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KLF3P57682 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KLF3P57682 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.45□□□□□ -0.26
KLF3P57682 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KLF3P57682 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
KLF3P57682 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
KLF3P57682 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms