Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 MIR661-201ENST00000384842 89 ntBASIC14.39□□□□□ -0.11
CLDN20P56880 HIST3H2BA-201ENST00000436555 524 ntBASIC14.39□□□□□ -0.11
CLDN20P56880 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CLDN20P56880 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.39□□□□□ -0.11
CLDN20P56880 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN20P56880 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 AC008738.7-201ENST00000609744 511 ntBASIC14.39□□□□□ -0.11
CLDN20P56880 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.39□□□□□ -0.11
CLDN20P56880 MIR6069-201ENST00000620069 79 ntBASIC14.39□□□□□ -0.11
CLDN20P56880 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN20P56880 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CLDN20P56880 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN20P56880 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN20P56880 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CLDN20P56880 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN20P56880 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CLDN20P56880 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN20P56880 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN20P56880 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.39□□□□□ -0.11
CLDN20P56880 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.39□□□□□ -0.11
CLDN20P56880 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLDN20P56880 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.39□□□□□ -0.11
CLDN20P56880 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CLDN20P56880 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
CLDN20P56880 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CLDN20P56880 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN20P56880 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDN20P56880 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDN20P56880 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDN20P56880 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CLDN20P56880 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CLDN20P56880 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CLDN20P56880 LINC02447-202ENST00000501888 2146 ntBASIC14.38□□□□□ -0.11
CLDN20P56880 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CLDN20P56880 AL109954.1-202ENST00000564051 2148 ntBASIC14.38□□□□□ -0.11
CLDN20P56880 PRAL-201ENST00000624952 3286 ntBASIC14.38□□□□□ -0.11
CLDN20P56880 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CLDN20P56880 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN20P56880 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDN20P56880 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 AZGP1P1-201ENST00000411909 902 ntBASIC14.38□□□□□ -0.11
CLDN20P56880 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.38□□□□□ -0.11
CLDN20P56880 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDN20P56880 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.38□□□□□ -0.11
CLDN20P56880 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.38□□□□□ -0.11
CLDN20P56880 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.38□□□□□ -0.11
CLDN20P56880 AC044860.1-202ENST00000559481 777 ntBASIC14.38□□□□□ -0.11
CLDN20P56880 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.38□□□□□ -0.11
CLDN20P56880 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.38□□□□□ -0.11
CLDN20P56880 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CLDN20P56880 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.38□□□□□ -0.11
CLDN20P56880 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CLDN20P56880 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CLDN20P56880 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CLDN20P56880 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CLDN20P56880 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CLDN20P56880 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.38□□□□□ -0.11
CLDN20P56880 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CLDN20P56880 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN20P56880 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN20P56880 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CLDN20P56880 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CLDN20P56880 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CLDN20P56880 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CLDN20P56880 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.37□□□□□ -0.11
CLDN20P56880 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms