Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AC004877.2-201ENST00000623941 599 ntBASIC13.7□□□□□ -0.22
GDNFP39905 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
GDNFP39905 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.7□□□□□ -0.22
GDNFP39905 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
GDNFP39905 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
GDNFP39905 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.7□□□□□ -0.22
GDNFP39905 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
GDNFP39905 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
GDNFP39905 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 ZNF259P1-201ENST00000407656 1365 ntBASIC13.7□□□□□ -0.22
GDNFP39905 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.7□□□□□ -0.22
GDNFP39905 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDNFP39905 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.69□□□□□ -0.22
GDNFP39905 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.69□□□□□ -0.22
GDNFP39905 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.69□□□□□ -0.22
GDNFP39905 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.69□□□□□ -0.22
GDNFP39905 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
GDNFP39905 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 AC023024.2-201ENST00000623561 1993 ntBASIC13.69□□□□□ -0.22
GDNFP39905 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.69□□□□□ -0.22
GDNFP39905 AC015656.1-201ENST00000624209 3578 ntBASIC13.69□□□□□ -0.22
GDNFP39905 AC006504.5-208ENST00000588784 2401 ntBASIC13.69□□□□□ -0.22
GDNFP39905 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.69□□□□□ -0.22
GDNFP39905 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 RNU1-129P-201ENST00000384064 167 ntBASIC13.69□□□□□ -0.22
GDNFP39905 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.69□□□□□ -0.22
GDNFP39905 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
GDNFP39905 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.69□□□□□ -0.22
GDNFP39905 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.69□□□□□ -0.22
GDNFP39905 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.69□□□□□ -0.22
GDNFP39905 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.69□□□□□ -0.22
GDNFP39905 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.69□□□□□ -0.22
GDNFP39905 AL031432.2-201ENST00000566714 459 ntBASIC13.69□□□□□ -0.22
GDNFP39905 AL928711.1-201ENST00000570165 459 ntBASIC13.69□□□□□ -0.22
GDNFP39905 U1.21-201ENST00000580816 167 ntBASIC13.69□□□□□ -0.22
GDNFP39905 AL513190.1-201ENST00000621254 727 ntBASIC13.69□□□□□ -0.22
GDNFP39905 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
GDNFP39905 AC025580.3-201ENST00000617932 1424 ntBASIC13.69□□□□□ -0.22
GDNFP39905 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
GDNFP39905 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
GDNFP39905 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.69□□□□□ -0.22
GDNFP39905 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.69□□□□□ -0.22
GDNFP39905 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.69□□□□□ -0.22
GDNFP39905 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDNFP39905 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
GDNFP39905 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.69□□□□□ -0.22
GDNFP39905 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.68□□□□□ -0.22
GDNFP39905 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.68□□□□□ -0.22
GDNFP39905 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
GDNFP39905 AP001282.1-201ENST00000531301 1499 ntBASIC13.68□□□□□ -0.22
GDNFP39905 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
GDNFP39905 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
GDNFP39905 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
GDNFP39905 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.68□□□□□ -0.22
GDNFP39905 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.68□□□□□ -0.22
GDNFP39905 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.68□□□□□ -0.22
GDNFP39905 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.68□□□□□ -0.22
GDNFP39905 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDNFP39905 MED15P5-201ENST00000423150 992 ntBASIC13.68□□□□□ -0.22
GDNFP39905 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.68□□□□□ -0.22
GDNFP39905 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms