Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BRAFP15056 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.17■□□□□ 0.18
BRAFP15056 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BRAFP15056 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BRAFP15056 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.17■□□□□ 0.18
BRAFP15056 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.17■□□□□ 0.18
BRAFP15056 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BRAFP15056 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
BRAFP15056 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRAFP15056 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
BRAFP15056 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.17■□□□□ 0.18
BRAFP15056 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
BRAFP15056 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRAFP15056 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BRAFP15056 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRAFP15056 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
BRAFP15056 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BRAFP15056 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
BRAFP15056 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
BRAFP15056 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
BRAFP15056 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
BRAFP15056 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRAFP15056 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BRAFP15056 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRAFP15056 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
BRAFP15056 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BRAFP15056 MIR346-201ENST00000362234 95 ntBASIC16.16■□□□□ 0.18
BRAFP15056 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.16■□□□□ 0.18
BRAFP15056 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.16■□□□□ 0.18
BRAFP15056 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.16■□□□□ 0.18
BRAFP15056 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.16■□□□□ 0.18
BRAFP15056 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.16■□□□□ 0.18
BRAFP15056 IGHV3-62-201ENST00000520057 340 ntBASIC16.16■□□□□ 0.18
BRAFP15056 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.16■□□□□ 0.18
BRAFP15056 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.16■□□□□ 0.18
BRAFP15056 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.16■□□□□ 0.18
BRAFP15056 AP000842.3-202ENST00000569238 1080 ntBASIC16.16■□□□□ 0.18
BRAFP15056 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.16■□□□□ 0.18
BRAFP15056 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.16■□□□□ 0.18
BRAFP15056 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
BRAFP15056 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BRAFP15056 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRAFP15056 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.16■□□□□ 0.18
BRAFP15056 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BRAFP15056 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRAFP15056 AL390755.1-201ENST00000623716 2027 ntBASIC16.16■□□□□ 0.18
BRAFP15056 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
BRAFP15056 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRAFP15056 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
BRAFP15056 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
BRAFP15056 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRAFP15056 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRAFP15056 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
BRAFP15056 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRAFP15056 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.15■□□□□ 0.18
BRAFP15056 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRAFP15056 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
BRAFP15056 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRAFP15056 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.15■□□□□ 0.18
BRAFP15056 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
BRAFP15056 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.15■□□□□ 0.18
BRAFP15056 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
BRAFP15056 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRAFP15056 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.15■□□□□ 0.18
BRAFP15056 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
BRAFP15056 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.15■□□□□ 0.18
BRAFP15056 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRAFP15056 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRAFP15056 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRAFP15056 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
BRAFP15056 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
BRAFP15056 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRAFP15056 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
BRAFP15056 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.15■□□□□ 0.18
BRAFP15056 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRAFP15056 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.15■□□□□ 0.18
BRAFP15056 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.15■□□□□ 0.18
BRAFP15056 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.15■□□□□ 0.18
BRAFP15056 KRT18P32-201ENST00000424695 1287 ntBASIC16.15■□□□□ 0.18
BRAFP15056 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.15■□□□□ 0.18
BRAFP15056 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.15■□□□□ 0.18
BRAFP15056 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
BRAFP15056 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
BRAFP15056 AC093724.1-201ENST00000448659 1027 ntBASIC16.15■□□□□ 0.18
BRAFP15056 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRAFP15056 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRAFP15056 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRAFP15056 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
BRAFP15056 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
BRAFP15056 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
BRAFP15056 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
BRAFP15056 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.15■□□□□ 0.18
BRAFP15056 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRAFP15056 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRAFP15056 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
BRAFP15056 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.15■□□□□ 0.18
BRAFP15056 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
BRAFP15056 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
BRAFP15056 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
BRAFP15056 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms